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LETM1-like protein [Arabidopsis thaliana]

NCBI Reference Sequence: NP_191541.1

Identical Proteins FASTA Graphics 

LOCUS       NP_191541                755 aa            linear   PLN 20-OCT-2022
DEFINITION  LETM1-like protein [Arabidopsis thaliana].
ACCESSION   NP_191541
VERSION     NP_191541.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_115844.4
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 755)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (residues 1 to 755)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 755)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 755)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to ANM65214.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     Protein         1..755
                     /product="LETM1-like protein"
                     /calculated_mol_wt=85604
     Region          <116..>175
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          242..475
                     /region_name="LETM1_RBD"
                     /note="LETM1-like, RBD; pfam07766"
                     /db_xref="CDD:462258"
     Region          683..738
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cl08302"
                     /db_xref="CDD:415501"
     Site            order(687,689,691,698,723,725,727,734)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     CDS             1..755
                     /gene="LETM1"
                     /locus_tag="AT3G59820"
                     /gene_synonym="AtLETM1; leucine zipper-EF-hand-containing
                     transmembrane protein 1"
                     /coded_by="NM_115844.4:406..2673"
                     /db_xref="GeneID:825151"
                     /db_xref="Araport:AT3G59820"
                     /db_xref="TAIR:AT3G59820"
ORIGIN      
        1 masraivrrk niisdylnvy arsiqsfqyi gnssqtvhsh ayhsginrpp vetkpvtehk
       61 sftrrdglll lsrngyfnrs fhgfhssgfg ygssevgpsl gmrymslsir nattvaakkp
      121 eeedkkvdel aknrkeaspe ecdqavesls svkakakakr lqeskkvars ivqrawaivl
      181 kigpaikava smnradwakk lthwkhefvs tlkhywlgtk llwadtriss rlllklaggk
      241 slsrrerqql trttadifrl vpfavfilvp fmefllpvfl klfpnmlpst fqdkmkeeea
      301 lkrkllarie yakflqetar emakevkhsr tgevkqtaed ldefldkvrr gqivhndell
      361 gfaklfndel tldnisrprl vsmckymgis pygtdaylry mlrkrlrsik eddkliraeg
      421 vdslseaelr edcrergmlg lvsveemrqq lrdwmdlsln hsvpssllil sraftvagrv
      481 kaedavratl sslpdevvdt vgitslpsed pvserrrkle ylemqeelik eeeekeeeel
      541 trikdvkggd edkalqemti ptaseaqeqa rarvleqqdd lcklsralgv lasassvcre
      601 reeflrlvkk evefyntmve redvdgekaa mkaykaarvd idqadevaea devssalmek
      661 vdgliqnlek eiddvdikig kgwqlldrdr dgkvtpdeva aaamylkdtl andglqqlis
      721 slskdkegri mvedivrlgr lgskpeenat eeess
//
Feature
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Protein clusters for NP_191541.1

Reference sequence information

More about the LETM1 gene

  • LETM1 gene
    Also Known As: AT3G59820, AtLETM1, leu...

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