LOCUS NP_189337 314 aa linear PLN 20-OCT-2022
DEFINITION TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20
[Arabidopsis thaliana].
ACCESSION NP_189337
VERSION NP_189337.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
DBSOURCE REFSEQ: accession NM_113615.4
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 314)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (residues 1 to 314)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 314)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (residues 1 to 314)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
The reference sequence is identical to AEE77254.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..314
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
Protein 1..314
/product="TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain
family protein 20"
/calculated_mol_wt=33260
Region 76..>139
/region_name="TCP"
/note="TCP family transcription factor; pfam03634"
/db_xref="CDD:460998"
CDS 1..314
/gene="TCP20"
/locus_tag="AT3G27010"
/gene_synonym="ARABIDOPSIS THALIANA TEOSINTE BRANCHED 1;
AT-TCP20; ATTCP20; cycloidea; CYCLOIDEA; PCF (TCP)-domain
family protein 20; PCF (TCP)-DOMAIN FAMILY PROTEIN 20;
PCF1; TEOSINTE BRANCHED 1"
/coded_by="NM_113615.4:192..1136"
/inference="Similar to RNA sequence,
EST:INSD:AV549932.1,INSD:EH886772.1,INSD:AI996951.1,
INSD:EH982007.1,INSD:AV537865.1,INSD:EH821611.1,
INSD:EH975166.1,INSD:BP804560.1,INSD:DR750995.1,
INSD:EH857129.1,INSD:EL072717.1,INSD:AU239030.1,
INSD:DR750996.1,INSD:ES031843.1,INSD:R84108.1,
INSD:AU230294.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT006043.1,INSD:AJ291749.1,INSD:AK118178.1"
/note="''TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain
family protein 20'' (TCP20); CONTAINS InterPro DOMAIN/s:
Transcription factor, TCP (InterPro:IPR005333),
Transcription factor TCP subgroup (InterPro:IPR017887);
BEST Arabidopsis thaliana protein match is: TCP family
transcription factor (TAIR:AT5G41030.1); Has 543 Blast
hits to 539 proteins in 120 species: Archae - 0; Bacteria
- 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0;
Other Eukaryotes - 1 (source: NCBI BLink)."
/db_xref="GeneID:822318"
/db_xref="TAIR:AT3G27010"
/db_xref="Araport:AT3G27010"
ORIGIN
1 mdpknlnrhq vpnflnpppp prnqglvddd aasavvsden rkptteikdf qivvsasdke
61 pnkksqnqnq lgpkrssnkd rhtkvegrgr rirmpalcaa rifqltrelg hksdgetiqw
121 llqqaepsii aatgsgtipa salassaats nhhqggslta glmishdldg gssssgrpln
181 wgigggegvs rsslptglwp nvagfgsgvp ttglmsegag yrigfpgfdf pgvghmsfas
241 ilggnhnqmp glelglsqeg nvgvlnpqsf tqiyqqmgqa qaqaqgrvlh hmhhnheehq
301 qesgekddsq gsgr
//