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TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 [Arabidopsis thaliana]

NCBI Reference Sequence: NP_189337.1

Identical Proteins FASTA Graphics 

LOCUS       NP_189337                314 aa            linear   PLN 20-OCT-2022
DEFINITION  TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20
            [Arabidopsis thaliana].
ACCESSION   NP_189337
VERSION     NP_189337.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_113615.4
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 314)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (residues 1 to 314)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 314)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 314)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to AEE77254.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     Protein         1..314
                     /product="TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain
                     family protein 20"
                     /calculated_mol_wt=33260
     Region          76..>139
                     /region_name="TCP"
                     /note="TCP family transcription factor; pfam03634"
                     /db_xref="CDD:460998"
     CDS             1..314
                     /gene="TCP20"
                     /locus_tag="AT3G27010"
                     /gene_synonym="ARABIDOPSIS THALIANA TEOSINTE BRANCHED 1;
                     AT-TCP20; ATTCP20; cycloidea; CYCLOIDEA; PCF (TCP)-domain
                     family protein 20; PCF (TCP)-DOMAIN FAMILY PROTEIN 20;
                     PCF1; TEOSINTE BRANCHED 1"
                     /coded_by="NM_113615.4:192..1136"
                     /inference="Similar to RNA sequence,
                     EST:INSD:AV549932.1,INSD:EH886772.1,INSD:AI996951.1,
                     INSD:EH982007.1,INSD:AV537865.1,INSD:EH821611.1,
                     INSD:EH975166.1,INSD:BP804560.1,INSD:DR750995.1,
                     INSD:EH857129.1,INSD:EL072717.1,INSD:AU239030.1,
                     INSD:DR750996.1,INSD:ES031843.1,INSD:R84108.1,
                     INSD:AU230294.1"
                     /inference="Similar to RNA sequence,
                     mRNA:INSD:BT006043.1,INSD:AJ291749.1,INSD:AK118178.1"
                     /note="''TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain
                     family protein 20'' (TCP20); CONTAINS InterPro DOMAIN/s:
                     Transcription factor, TCP (InterPro:IPR005333),
                     Transcription factor TCP subgroup (InterPro:IPR017887);
                     BEST Arabidopsis thaliana protein match is: TCP family
                     transcription factor (TAIR:AT5G41030.1); Has 543 Blast
                     hits to 539 proteins in 120 species: Archae - 0; Bacteria
                     - 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0;
                     Other Eukaryotes - 1 (source: NCBI BLink)."
                     /db_xref="GeneID:822318"
                     /db_xref="TAIR:AT3G27010"
                     /db_xref="Araport:AT3G27010"
ORIGIN      
        1 mdpknlnrhq vpnflnpppp prnqglvddd aasavvsden rkptteikdf qivvsasdke
       61 pnkksqnqnq lgpkrssnkd rhtkvegrgr rirmpalcaa rifqltrelg hksdgetiqw
      121 llqqaepsii aatgsgtipa salassaats nhhqggslta glmishdldg gssssgrpln
      181 wgigggegvs rsslptglwp nvagfgsgvp ttglmsegag yrigfpgfdf pgvghmsfas
      241 ilggnhnqmp glelglsqeg nvgvlnpqsf tqiyqqmgqa qaqaqgrvlh hmhhnheehq
      301 qesgekddsq gsgr
//
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Protein clusters for NP_189337.1

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