LOCUS NP_187125 1703 aa linear PLN 20-OCT-2022
DEFINITION RNA polymerase II transcription mediator [Arabidopsis thaliana].
ACCESSION NP_187125
VERSION NP_187125.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
DBSOURCE REFSEQ: accession NM_111346.4
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 1703)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (residues 1 to 1703)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 1703)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (residues 1 to 1703)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
The reference sequence is identical to AEE74130.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..1703
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
Protein 1..1703
/product="RNA polymerase II transcription mediator"
/calculated_mol_wt=185378
Region 8..198
/region_name="Med14"
/note="Mediator complex subunit MED14; pfam08638"
/db_xref="CDD:462543"
CDS 1..1703
/gene="SWP"
/locus_tag="AT3G04740"
/gene_synonym="ARABIDOPSIS MEDIATOR COMPONENTS 14;
ATMED14; F7O18.23; F7O18_23; MED14; MEDIATOR COMPONENTS
14; STRUWWELPETER"
/coded_by="NM_111346.4:240..5351"
/inference="Similar to RNA sequence,
EST:INSD:AV548783.1,INSD:AV554774.1,INSD:AU229257.1,
INSD:ES213293.1,INSD:AA042474.1,INSD:AV523327.1,
INSD:AU238120.1,INSD:EH881150.1,INSD:ES072077.1,
INSD:AV546112.1,INSD:AV523680.1,INSD:AV527610.1,
INSD:ES165599.1,INSD:ES135460.1,INSD:EH824032.1,
INSD:EL029164.1,INSD:ES116395.1,INSD:EL031441.1,
INSD:ES010911.1,INSD:EL092767.1,INSD:AV528979.1,
INSD:EH963820.1,INSD:EH842390.1,INSD:AV521853.1,
INSD:EH870633.1,INSD:AV521012.1,INSD:EL982760.1,
INSD:AV528509.1,INSD:BE526380.1,INSD:AV522951.1,
INSD:EH868824.1,INSD:AV529423.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AJ511271.1,INSD:AF466359.1"
/note="STRUWWELPETER (SWP); FUNCTIONS IN: RNA polymerase
II transcription mediator activity; INVOLVED IN: positive
regulation of transcription, positive regulation of cell
proliferation; LOCATED IN: mediator complex; EXPRESSED IN:
25 plant structures; EXPRESSED DURING: 15 growth stages;
CONTAINS InterPro DOMAIN/s: Mediator complex, subunit
Med14 (InterPro:IPR013947); Has 940 Blast hits to 375
proteins in 163 species: Archae - 0; Bacteria - 61;
Metazoa - 117; Fungi - 104; Plants - 74; Viruses - 0;
Other Eukaryotes - 584 (source: NCBI BLink)."
/db_xref="GeneID:819634"
/db_xref="TAIR:AT3G04740"
/db_xref="Araport:AT3G04740"
ORIGIN
1 maelgqqtvd fsalvgraae esflsfkelv dkskstelsd tekkvsllky vaktqqrmlr
61 lnalakwckq vplinyfqdl gstlsahdic ftqaadslff mheglqqara pvydvpsave
121 illtgsyqrl pkclddvgmq ssldehqqkp alrklevlvr sklleitlpk eitevkiskg
181 tvtlsvdgef kvlvtlgyrg hlsmwrilhl dllvgersgp iklevtrrhi lgddlerrms
241 vaenpftily avlhelcvai vmdtvirqvr allqgrwkda irfdlisdtg ttpanqegea
301 dsvslrtpgm klfywsdsdk nsgpfikiep gsdlqikcsh stfvidpltg keaefsldqs
361 cidveklllk aiccnrytrl leiqkellrn tricrtpsdv ilqalldepg iegdnmvdsk
421 ervepevlrv raygssfftl ginirtgrfl lqssksilts sileefedal nqgsisavda
481 finlrsksil hffaaigkfl glevyehgfg inkvpkslld gssiltlgfp dcesshlllm
541 elekdftplf klletqmdgs gkpqsfndps nilrakkidi gqirileddl nlitsdvvkf
601 vssfsdaegi nqasghrqpg lvdealtems gsqlsfssvv dgvfglqkvt salmsidghg
661 lvpknlsavt ghgkapmlts yhsdslynrq gplqsssynm lssppgkgsa mkkiaisnsd
721 qelslilsps lstgngvses gsrlvtessl splplsqtad latssagpll rkdqkprkrs
781 asdllrlips lqvvegvasp nkrrktselv qselvkswsp asqtlstavs tstktigcsy
841 gnliaeankg napssvfvya llhvvrhssl sikhakltsq mealdiqyve emglrdafsd
901 iwfrlpfaqn dswqhiclql grpgsmcwdv kindqhfrdl welqkgsktt pwgsgvhian
961 ssdvdshiry dpegvvlsyq sveadsikkl vadiqrlsna rmfslgmrkl lgikpdekte
1021 ecsanstmkg stggkgsgep vdrwrafkie avgltslwfs fgsgvlarfv vewesgkdgc
1081 tmhvspdqlw phtkfledfi ngaeveslld cirltagplh alaaatrpar astatgmpvv
1141 patassrqsn qiqqtqgiia pstlaapnat gqsasatsgn tvassapspl gggfhgvaml
1201 aaagrsgpgi vpssllpidv svvlrgpywi riiyrkrfav dmrcfagdqv wlqpatppkg
1261 gasiggslpc pqfrpfimeh vaqelnglep nltgsqgatn pnsgnptvng vnrvnfspss
1321 araamnrvas vasgslvvss glpvrrtpgt avpahvrgel ntaiiglgdd ggygggwvpl
1381 valkkvlrgi lkylgvlwlf aqlpdllrei lgsilkdneg allnldqeqp alrffvggyv
1441 favsvhrvql llqvlsvrrf hhqaqqngss aaaqeeltqs eigeicdyfs rrvasepyda
1501 srvasfitll tlpisvlref lkliawkkgl sqsqqageia paqrprielc lenhsgtdld
1561 nncaaksnih ydrphntvdf altvvldpvh iphinaagga awlpycvsvr lrytfgenps
1621 vtflgmegsh ggracwqrvd dwekckqrvs rtvevngsaa gdltqgklkl vadsvqrtlh
1681 lclqglregg nnnnnthqke fti
//