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RNA polymerase II transcription mediator [Arabidopsis thaliana]

NCBI Reference Sequence: NP_187125.1

Identical Proteins FASTA Graphics 

LOCUS       NP_187125               1703 aa            linear   PLN 20-OCT-2022
DEFINITION  RNA polymerase II transcription mediator [Arabidopsis thaliana].
ACCESSION   NP_187125
VERSION     NP_187125.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_111346.4
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 1703)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (residues 1 to 1703)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 1703)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 1703)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to AEE74130.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..1703
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     Protein         1..1703
                     /product="RNA polymerase II transcription mediator"
                     /calculated_mol_wt=185378
     Region          8..198
                     /region_name="Med14"
                     /note="Mediator complex subunit MED14; pfam08638"
                     /db_xref="CDD:462543"
     CDS             1..1703
                     /gene="SWP"
                     /locus_tag="AT3G04740"
                     /gene_synonym="ARABIDOPSIS MEDIATOR COMPONENTS 14;
                     ATMED14; F7O18.23; F7O18_23; MED14; MEDIATOR COMPONENTS
                     14; STRUWWELPETER"
                     /coded_by="NM_111346.4:240..5351"
                     /inference="Similar to RNA sequence,
                     EST:INSD:AV548783.1,INSD:AV554774.1,INSD:AU229257.1,
                     INSD:ES213293.1,INSD:AA042474.1,INSD:AV523327.1,
                     INSD:AU238120.1,INSD:EH881150.1,INSD:ES072077.1,
                     INSD:AV546112.1,INSD:AV523680.1,INSD:AV527610.1,
                     INSD:ES165599.1,INSD:ES135460.1,INSD:EH824032.1,
                     INSD:EL029164.1,INSD:ES116395.1,INSD:EL031441.1,
                     INSD:ES010911.1,INSD:EL092767.1,INSD:AV528979.1,
                     INSD:EH963820.1,INSD:EH842390.1,INSD:AV521853.1,
                     INSD:EH870633.1,INSD:AV521012.1,INSD:EL982760.1,
                     INSD:AV528509.1,INSD:BE526380.1,INSD:AV522951.1,
                     INSD:EH868824.1,INSD:AV529423.1"
                     /inference="Similar to RNA sequence,
                     mRNA:INSD:AJ511271.1,INSD:AF466359.1"
                     /note="STRUWWELPETER (SWP); FUNCTIONS IN: RNA polymerase
                     II transcription mediator activity; INVOLVED IN: positive
                     regulation of transcription, positive regulation of cell
                     proliferation; LOCATED IN: mediator complex; EXPRESSED IN:
                     25 plant structures; EXPRESSED DURING: 15 growth stages;
                     CONTAINS InterPro DOMAIN/s: Mediator complex, subunit
                     Med14 (InterPro:IPR013947); Has 940 Blast hits to 375
                     proteins in 163 species: Archae - 0; Bacteria - 61;
                     Metazoa - 117; Fungi - 104; Plants - 74; Viruses - 0;
                     Other Eukaryotes - 584 (source: NCBI BLink)."
                     /db_xref="GeneID:819634"
                     /db_xref="TAIR:AT3G04740"
                     /db_xref="Araport:AT3G04740"
ORIGIN      
        1 maelgqqtvd fsalvgraae esflsfkelv dkskstelsd tekkvsllky vaktqqrmlr
       61 lnalakwckq vplinyfqdl gstlsahdic ftqaadslff mheglqqara pvydvpsave
      121 illtgsyqrl pkclddvgmq ssldehqqkp alrklevlvr sklleitlpk eitevkiskg
      181 tvtlsvdgef kvlvtlgyrg hlsmwrilhl dllvgersgp iklevtrrhi lgddlerrms
      241 vaenpftily avlhelcvai vmdtvirqvr allqgrwkda irfdlisdtg ttpanqegea
      301 dsvslrtpgm klfywsdsdk nsgpfikiep gsdlqikcsh stfvidpltg keaefsldqs
      361 cidveklllk aiccnrytrl leiqkellrn tricrtpsdv ilqalldepg iegdnmvdsk
      421 ervepevlrv raygssfftl ginirtgrfl lqssksilts sileefedal nqgsisavda
      481 finlrsksil hffaaigkfl glevyehgfg inkvpkslld gssiltlgfp dcesshlllm
      541 elekdftplf klletqmdgs gkpqsfndps nilrakkidi gqirileddl nlitsdvvkf
      601 vssfsdaegi nqasghrqpg lvdealtems gsqlsfssvv dgvfglqkvt salmsidghg
      661 lvpknlsavt ghgkapmlts yhsdslynrq gplqsssynm lssppgkgsa mkkiaisnsd
      721 qelslilsps lstgngvses gsrlvtessl splplsqtad latssagpll rkdqkprkrs
      781 asdllrlips lqvvegvasp nkrrktselv qselvkswsp asqtlstavs tstktigcsy
      841 gnliaeankg napssvfvya llhvvrhssl sikhakltsq mealdiqyve emglrdafsd
      901 iwfrlpfaqn dswqhiclql grpgsmcwdv kindqhfrdl welqkgsktt pwgsgvhian
      961 ssdvdshiry dpegvvlsyq sveadsikkl vadiqrlsna rmfslgmrkl lgikpdekte
     1021 ecsanstmkg stggkgsgep vdrwrafkie avgltslwfs fgsgvlarfv vewesgkdgc
     1081 tmhvspdqlw phtkfledfi ngaeveslld cirltagplh alaaatrpar astatgmpvv
     1141 patassrqsn qiqqtqgiia pstlaapnat gqsasatsgn tvassapspl gggfhgvaml
     1201 aaagrsgpgi vpssllpidv svvlrgpywi riiyrkrfav dmrcfagdqv wlqpatppkg
     1261 gasiggslpc pqfrpfimeh vaqelnglep nltgsqgatn pnsgnptvng vnrvnfspss
     1321 araamnrvas vasgslvvss glpvrrtpgt avpahvrgel ntaiiglgdd ggygggwvpl
     1381 valkkvlrgi lkylgvlwlf aqlpdllrei lgsilkdneg allnldqeqp alrffvggyv
     1441 favsvhrvql llqvlsvrrf hhqaqqngss aaaqeeltqs eigeicdyfs rrvasepyda
     1501 srvasfitll tlpisvlref lkliawkkgl sqsqqageia paqrprielc lenhsgtdld
     1561 nncaaksnih ydrphntvdf altvvldpvh iphinaagga awlpycvsvr lrytfgenps
     1621 vtflgmegsh ggracwqrvd dwekckqrvs rtvevngsaa gdltqgklkl vadsvqrtlh
     1681 lclqglregg nnnnnthqke fti
//
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Protein clusters for NP_187125.1

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