U.S. flag

An official website of the United States government

hypothetical protein (DUF295) [Arabidopsis thaliana]

NCBI Reference Sequence: NP_177061.1

Identical Proteins FASTA Graphics 

LOCUS       NP_177061                376 aa            linear   PLN 20-OCT-2022
DEFINITION  hypothetical protein (DUF295) [Arabidopsis thaliana].
ACCESSION   NP_177061
VERSION     NP_177061.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_105569.2
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 376)
  AUTHORS   Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
            White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
            Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
            Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
            Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
            Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
            Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
            Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
            Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
            Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
            Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
            Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
            Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
            Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
            Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
            Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
            Fraser,C.M., Venter,J.C. and Davis,R.W.
  TITLE     Sequence and analysis of chromosome 1 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 816-820 (2000)
   PUBMED   11130712
REFERENCE   2  (residues 1 to 376)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 376)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 376)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   5  (residues 1 to 376)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to AEE34870.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     Protein         1..376
                     /product="hypothetical protein (DUF295)"
                     /calculated_mol_wt=42447
     Region          304..349
                     /region_name="DUF295"
                     /note="Protein of unknown function (DUF295); pfam03478"
                     /db_xref="CDD:460939"
     CDS             1..376
                     /locus_tag="AT1G68960"
                     /gene_synonym="T6L1.14; T6L1_14"
                     /coded_by="NM_105569.2:48..1178"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EG442696.1,INSD:EG442333.1,INSD:EG442237.1,
                     INSD:EG442697.1,INSD:EG442239.1,INSD:EG442240.1,
                     INSD:EG442699.1,INSD:EG442695.1,INSD:EG442236.1,
                     INSD:EG442323.1,INSD:EG442335.1,INSD:EG442324.1,
                     INSD:EG442238.1,INSD:EG442326.1,INSD:EG442330.1,
                     INSD:EG442328.1,INSD:EG442235.1"
                     /note="Protein of unknown function (DUF295); FUNCTIONS IN:
                     molecular_function unknown; INVOLVED IN:
                     biological_process unknown; LOCATED IN: mitochondrion;
                     CONTAINS InterPro DOMAIN/s: Protein of unknown function
                     DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana
                     protein match is: Protein of unknown function (DUF295)
                     (TAIR:AT5G03390.1); Has 312 Blast hits to 302 proteins in
                     9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
                     0; Plants - 312; Viruses - 0; Other Eukaryotes - 0
                     (source: NCBI BLink)."
                     /db_xref="Araport:AT1G68960"
                     /db_xref="GeneID:843230"
                     /db_xref="TAIR:AT1G68960"
ORIGIN      
        1 msqllcrisk lstsrnrilc frrsefstvt aeattpylll gsdlvgkspc dgkvvnfnly
       61 dprkqeqvki enkilskevy eshklgssrg wlallnkkds tvrltnilnp skkiislpsl
      121 trdkyeshvn vsvsssneed cvvavkfygs rvslcrpgds ewtridvpcp sfhsstviys
      181 erdrrfylnn cnpdytgptd ftpksglhtp vsgykrflfs nfleempele nerrlsrfri
      241 qqqlvesasg qsfivawfve sltdkgevat wgdtrynnnk dlckkthkim virqdeeqgi
      301 gpytddigdl ciflgenesf clsakdfpgl npnsvyfagh gsgygiwdla sctirylsds
      361 tpppgrmfwl pptisq
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Protein clusters for NP_177061.1

Reference sequence information

  • RefSeq mRNA
    See reference mRNA sequence for the AT1G68960 gene (NM_105569.2).
  • RefSeq protein isoforms
    See the other reference sequence protein isoform for the AT1G68960 gene (NP_001185354.1).

More about the AT1G68960 gene

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.