LOCUS NP_177061 376 aa linear PLN 20-OCT-2022
DEFINITION hypothetical protein (DUF295) [Arabidopsis thaliana].
ACCESSION NP_177061
VERSION NP_177061.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
DBSOURCE REFSEQ: accession NM_105569.2
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 376)
AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
Fraser,C.M., Venter,J.C. and Davis,R.W.
TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 816-820 (2000)
PUBMED 11130712
REFERENCE 2 (residues 1 to 376)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 376)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (residues 1 to 376)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 5 (residues 1 to 376)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
The reference sequence is identical to AEE34870.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..376
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="1"
/ecotype="Columbia"
Protein 1..376
/product="hypothetical protein (DUF295)"
/calculated_mol_wt=42447
Region 304..349
/region_name="DUF295"
/note="Protein of unknown function (DUF295); pfam03478"
/db_xref="CDD:460939"
CDS 1..376
/locus_tag="AT1G68960"
/gene_synonym="T6L1.14; T6L1_14"
/coded_by="NM_105569.2:48..1178"
/inference="Similar to RNA sequence,
EST:INSD:EG442696.1,INSD:EG442333.1,INSD:EG442237.1,
INSD:EG442697.1,INSD:EG442239.1,INSD:EG442240.1,
INSD:EG442699.1,INSD:EG442695.1,INSD:EG442236.1,
INSD:EG442323.1,INSD:EG442335.1,INSD:EG442324.1,
INSD:EG442238.1,INSD:EG442326.1,INSD:EG442330.1,
INSD:EG442328.1,INSD:EG442235.1"
/note="Protein of unknown function (DUF295); FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana
protein match is: Protein of unknown function (DUF295)
(TAIR:AT5G03390.1); Has 312 Blast hits to 302 proteins in
9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 312; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink)."
/db_xref="Araport:AT1G68960"
/db_xref="GeneID:843230"
/db_xref="TAIR:AT1G68960"
ORIGIN
1 msqllcrisk lstsrnrilc frrsefstvt aeattpylll gsdlvgkspc dgkvvnfnly
61 dprkqeqvki enkilskevy eshklgssrg wlallnkkds tvrltnilnp skkiislpsl
121 trdkyeshvn vsvsssneed cvvavkfygs rvslcrpgds ewtridvpcp sfhsstviys
181 erdrrfylnn cnpdytgptd ftpksglhtp vsgykrflfs nfleempele nerrlsrfri
241 qqqlvesasg qsfivawfve sltdkgevat wgdtrynnnk dlckkthkim virqdeeqgi
301 gpytddigdl ciflgenesf clsakdfpgl npnsvyfagh gsgygiwdla sctirylsds
361 tpppgrmfwl pptisq
//