LOCUS NP_175157 530 aa linear PLN 20-OCT-2022
DEFINITION NRAMP metal ion transporter 2 [Arabidopsis thaliana].
ACCESSION NP_175157
VERSION NP_175157.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
DBSOURCE REFSEQ: accession NM_103618.3
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 530)
AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
Fraser,C.M., Venter,J.C. and Davis,R.W.
TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 816-820 (2000)
PUBMED 11130712
REFERENCE 2 (residues 1 to 530)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 530)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (residues 1 to 530)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 5 (residues 1 to 530)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
The reference sequence is identical to AEE32142.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..530
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="1"
/ecotype="Columbia"
Protein 1..530
/product="NRAMP metal ion transporter 2"
/calculated_mol_wt=58286
Region 66..444
/region_name="SLC5-6-like_sbd"
/note="Solute carrier families 5 and 6-like; solute
binding domain; cl00456"
/db_xref="CDD:444915"
CDS 1..530
/gene="NRAMP2"
/locus_tag="AT1G47240"
/gene_synonym="ATNRAMP2; F8G22.4; F8G22_4; NRAMP metal ion
transporter 2"
/coded_by="NM_103618.3:198..1790"
/inference="Similar to RNA sequence,
EST:INSD:BP815024.1,INSD:EL323227.1,INSD:AV824124.1,
INSD:BP781632.1,INSD:AV785281.1,INSD:EL158311.1,
INSD:ES188745.1,INSD:EH922584.1,INSD:AV796356.1,
INSD:ES080186.1,INSD:ES030288.1"
/inference="similar to RNA sequence,
mRNA:INSD:AF410320.1,INSD:AF141204.1,INSD:AY102128.1"
/note="NRAMP metal ion transporter 2 (NRAMP2); FUNCTIONS
IN: inorganic anion transmembrane transporter activity,
metal ion transmembrane transporter activity; INVOLVED IN:
cellular metal ion homeostasis, metal ion transport;
LOCATED IN: membrane; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Natural resistance-associated macrophage protein
(InterPro:IPR001046); BEST Arabidopsis thaliana protein
match is: natural resistance-associated macrophage protein
3 (TAIR:AT2G23150.1); Has 4906 Blast hits to 4864 proteins
in 1503 species: Archae - 114; Bacteria - 3503; Metazoa -
369; Fungi - 260; Plants - 341; Viruses - 0; Other
Eukaryotes - 319 (source: NCBI BLink)."
/db_xref="Araport:AT1G47240"
/db_xref="GeneID:841127"
/db_xref="TAIR:AT1G47240"
ORIGIN
1 mendvkenle eeedrllppp ppsqslpstd seseaafetn ekilivdfes pddpttgdtp
61 ppfswrklwl ftgpgflmsi afldpgnleg dlqagaiagy sllwllmwat amglliqmls
121 arvgvatgrh laelcrdeyp twaryvlwsm aelaligadi qevigsaiai qilsrgflpl
181 wagvvitasd cflflfleny gvrkleavfa vliatmglsf awmfgetkps gkelmigill
241 prlssktirq avgvvgcvim phnvflhsal vqsrkidpkr ksrvqealny yliessvalf
301 isfminlfvt tvfakgfygt ekanniglvn agqylqekfg ggllpilyiw gigllaagqs
361 stitgtyagq fimggflnlr lkkwmravit rscaivptmi vaivfntsea sldvlnewln
421 vlqsvqipfa llplltlvsk eeimgdfkig pilqriawtv aalvmiingy llldffvsev
481 dgflfgvtvc vwttayiafi vylishsnff pspwssssie lpkrvsvsns
//