U.S. flag

An official website of the United States government

GroES-like zinc-binding dehydrogenase family protein [Arabidopsis thaliana]

NCBI Reference Sequence: NP_001190468.1

Identical Proteins FASTA Graphics 

LOCUS       NP_001190468             391 aa            linear   PLN 20-OCT-2022
DEFINITION  GroES-like zinc-binding dehydrogenase family protein [Arabidopsis
            thaliana].
ACCESSION   NP_001190468
VERSION     NP_001190468.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_001203539.1
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 391)
  AUTHORS   Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
            Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
            Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
            Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
            Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
            Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
            Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
            Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
            Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
            Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
            Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
            See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
            Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
            Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
            Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
            Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
            Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
            Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
            Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
            Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
            Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
            Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
            Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
  CONSRTM   Kazusa DNA Research Institute; Cold Spring Harbor and Washington
            University in St Louis Sequencing Consortium; European Union
            Arabidopsis Genome Sequencing Consortium
  TITLE     Sequence and analysis of chromosome 5 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 823-826 (2000)
   PUBMED   11130714
REFERENCE   2  (residues 1 to 391)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 391)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 391)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to AED95035.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="5"
                     /ecotype="Columbia"
     Protein         1..391
                     /product="GroES-like zinc-binding dehydrogenase family
                     protein"
                     /calculated_mol_wt=41912
     Region          8..388
                     /region_name="alcohol_DH_class_III"
                     /note="class III alcohol dehydrogenases; cd08300"
                     /db_xref="CDD:176260"
     Site            order(59,61,70..72,81,107..108,189,309,333)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:176260"
     Site            order(59,81..82,189)
                     /site_type="other"
                     /note="catalytic Zn binding site [ion binding]"
                     /db_xref="CDD:176260"
     Site            order(60..61,189,193,214..218,238..239,243,283..284,
                     288..289,307..308,332..334,384)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:176260"
     Site            order(111,114,117,125)
                     /site_type="other"
                     /note="structural Zn binding site [ion binding]"
                     /db_xref="CDD:176260"
     Site            order(115..116,119,121..122,124,126,274,279,290..291,
                     298..301,310,313..320,323..325,328..333)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:176260"
     CDS             1..391
                     /gene="HOT5"
                     /locus_tag="AT5G43940"
                     /gene_synonym="ADH2; ALCOHOL DEHYDROGENASE 2; ATGSNOR1;
                     FALDH; GLUTATHIONE-DEPENDENT FORMALDEHYDE DEHYDROGENASE;
                     GSNOR; MRH10.4; MRH10_4; PAR2; PARAQUAT RESISTANT 2;
                     S-NITROSOGLUTATHIONE REDUCTASE; sensitive to hot
                     temperatures 5"
                     /coded_by="NM_001203539.1:110..1285"
                     /note="sensitive to hot temperatures 5 (HOT5); CONTAINS
                     InterPro DOMAIN/s: GroES-like (InterPro:IPR011032),
                     Alcohol dehydrogenase, zinc-containing, conserved site
                     (InterPro:IPR002328), Alcohol dehydrogenase GroES-like
                     (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal
                     (InterPro:IPR013149), Alcohol dehydrogenase class
                     III/S-(hydroxymethyl)glutathione dehydrogenase
                     (InterPro:IPR014183), Alcohol dehydrogenase superfamily,
                     zinc-containing (InterPro:IPR002085); BEST Arabidopsis
                     thaliana protein match is: alcohol dehydrogenase 1
                     (TAIR:AT1G77120.1)."
                     /db_xref="GeneID:834417"
                     /db_xref="TAIR:AT5G43940"
                     /db_xref="Araport:AT5G43940"
ORIGIN      
        1 matqgqvitc kgtfildprt ltisavayep nkplviedvq vappqagevr ikilytalch
       61 tdaytwsgkd peglfpcilg heaagivesv gegvtevqag dhvipcyqae creckfcksg
      121 ktnlcgkvrs atgvgimmnd rksrfsvngk piyhfmgtst fsqytvvhdv svakidptap
      181 ldkvcllgcg vptglgavwn takvepgsnv aifglgtvgl avaegaktag asriigidid
      241 skkyetakkf gvnefvnpkd hdkpiqeviv dltdggvdys fecignvsvm raalecchkg
      301 wgtsvivgva asgqeistrp fqlvtgrvwk gtafggfksr tqvpwlveky mnkeikvdey
      361 ithnltlgei nkafdllheg tclrcvldts k
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Protein 3D Structure

See all 4 structures...

Protein clusters for NP_001190468.1

Reference sequence information

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.