U.S. flag

An official website of the United States government

squamosa promoter binding protein-like 7 [Arabidopsis thaliana]

NCBI Reference Sequence: NP_001190333.1

Identical Proteins FASTA Graphics 

LOCUS       NP_001190333             818 aa            linear   PLN 20-OCT-2022
DEFINITION  squamosa promoter binding protein-like 7 [Arabidopsis thaliana].
ACCESSION   NP_001190333
VERSION     NP_001190333.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_001203404.1
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 818)
  AUTHORS   Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
            Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
            Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
            Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
            Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
            Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
            Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
            Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
            Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
            Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
            Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
            See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
            Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
            Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
            Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
            Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
            Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
            Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
            Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
            Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
            Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
            Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
            Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
  CONSRTM   Kazusa DNA Research Institute; Cold Spring Harbor and Washington
            University in St Louis Sequencing Consortium; European Union
            Arabidopsis Genome Sequencing Consortium
  TITLE     Sequence and analysis of chromosome 5 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 823-826 (2000)
   PUBMED   11130714
REFERENCE   2  (residues 1 to 818)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 818)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 818)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to AED92619.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="5"
                     /ecotype="Columbia"
     Protein         1..818
                     /product="squamosa promoter binding protein-like 7"
                     /calculated_mol_wt=91420
     Region          138..212
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..818
                     /gene="SPL7"
                     /locus_tag="AT5G18830"
                     /gene_synonym="ATSPL7; F17K4.80; F17K4_80; squamosa
                     promoter binding protein-like 7; SQUAMOSA PROMOTER BINDING
                     PROTEIN-LIKE 7"
                     /coded_by="NM_001203404.1:127..2583"
                     /note="squamosa promoter binding protein-like 7 (SPL7);
                     FUNCTIONS IN: DNA binding, sequence-specific DNA binding
                     transcription factor activity; INVOLVED IN: copper ion
                     homeostasis, regulation of transcription; LOCATED IN:
                     nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED
                     DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
                     Transcription factor, SBP-box (InterPro:IPR004333); BEST
                     Arabidopsis thaliana protein match is: squamosa promoter
                     binding protein-like 1 (TAIR:AT2G47070.1)."
                     /db_xref="GeneID:832001"
                     /db_xref="TAIR:AT5G18830"
                     /db_xref="Araport:AT5G18830"
ORIGIN      
        1 msslsqsppp pemdiqppal vnddpstyss alwdwgdlld faaderllvd qihfppvlsp
       61 plppliptqt paeseldpsp eesgsgsdrv rkrdprlics nfiegmlpcs cpeldqkled
      121 aelpkkkrvr ggsgvarcqv pdceadisel kgyhkrhrvc lrcatasfvv ldgenkrycq
      181 qcgkfhllpd fdegkrscrr klerhnnrrk rkpvdkggva aeqqqvlsqn dnsvidvedg
      241 kditcssdqr aeeepslife drhittqgsv pftrsinadn fvsvtgsgea qpdegmndtk
      301 ferspsngdn ksaystvcpt grisfklydw npaefprrlr hqifqwlanm pvelegyirp
      361 gctiltvfia mpeimwakls kdpvayldef ilkpgkmlfg rgsmtvylnn mifrlikggt
      421 tlkrvdvkle spklqfvypt cfeagkpiel vvcgqnllqp kcrflvsfsg kylphnysvv
      481 papdqdgkrs cnnkfykini vnsdpslfgp afvevenesg lsnfipliig daavcsemkl
      541 ieqkfnatlf pegqevtacs sltcccrdfg erqstfsgll ldiawsvkvp saerteqpvn
      601 rcqikrynrv lnyliqnnsa silgnvlhnl etlvkkmepd slvhctcdcd vrllhenmdl
      661 asdihrkhqs pieskvnpps sgcccvssqk dipsrilnfn kdpeagldck eriqadcspd
      721 sggketdpll nkevvmnvnd igdwprksci kthsalafrs rqtmfliatf avcfavcavl
      781 yhpnkvtqla vairmrlcst elshnsfses fpserdri
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Protein 3D Structure

Protein clusters for NP_001190333.1

Reference sequence information

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.