LOCUS NP_001078407 365 aa linear PLN 20-OCT-2022
DEFINITION TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2
[Arabidopsis thaliana].
ACCESSION NP_001078407
VERSION NP_001078407.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
DBSOURCE REFSEQ: accession NM_001084938.1
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 365)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (residues 1 to 365)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 365)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (residues 1 to 365)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
The reference sequence is identical to AEE84040.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..365
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
Protein 1..365
/product="TEOSINTE BRANCHED 1, cycloidea and PCF
transcription factor 2"
/calculated_mol_wt=40048
Region 18..365
/region_name="TCP2"
/note="Protein TCP2; Provisional; PLN03106"
/db_xref="CDD:215579"
CDS 1..365
/gene="TCP2"
/locus_tag="AT4G18390"
/gene_synonym="cycloidea and PCF transcription factor 2;
F28J12.50; F28J12_50; TEOSINTE BRANCHED 1"
/coded_by="NM_001084938.1:239..1336"
/inference="Similar to RNA sequence,
EST:INSD:ES152922.1,INSD:EL303144.1,INSD:EH877229.1,
INSD:EL997596.1,INSD:ES092138.1,INSD:EL268948.1,
INSD:EL304012.1,INSD:EH937098.1,INSD:AI994542.1,
INSD:DR751293.1,INSD:BX835939.1,INSD:DR379749.1,
INSD:AV797759.1,INSD:ES137267.1,INSD:BX835543.1,
INSD:AV797703.1,INSD:EL981531.1,INSD:DR272271.1,
INSD:EG496325.1,INSD:EL089051.1,INSD:EG496335.1,
INSD:ES168771.1,INSD:CK118227.1,INSD:EL299600.1,
INSD:EL073769.1,INSD:ES147829.1,INSD:DR335294.1,
INSD:EL337077.1,INSD:AV795100.1,INSD:AV801172.1,
INSD:ES019205.1,INSD:R29994.1,INSD:EL006458.1,
INSD:ES197761.1,INSD:DR272272.1,INSD:BP793837.1,
INSD:EH910924.1,INSD:ES206493.1,INSD:EG496322.1,
INSD:AI100690.1,INSD:AV518740.1,INSD:BP780319.1,
INSD:EG496334.1,INSD:DR272269.1,INSD:EG496321.1,
INSD:EH912343.1,INSD:ES170559.1,INSD:R30409.1,
INSD:DR751294.1,INSD:ES022758.1,INSD:DR371657.1,
INSD:EL031557.1,INSD:EH857587.1,INSD:BP783337.1,
INSD:DR210095.1,INSD:EL135051.1,INSD:EH843511.1,
INSD:EG496326.1,INSD:EL177810.1,INSD:AV800155.1,
INSD:T42571.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF072691.1,INSD:AY102141.1,INSD:AY084306.1"
/note="''TEOSINTE BRANCHED 1, cycloidea and PCF
transcription factor 2'' (TCP2); FUNCTIONS IN:
sequence-specific DNA binding transcription factor
activity; INVOLVED IN: cell differentiation, positive
regulation of development, heterochronic, regulation of
transcription, leaf morphogenesis; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Transcription factor, TCP
(InterPro:IPR005333), CYC/TB1, R domain
(InterPro:IPR017888), Transcription factor TCP subgroup
(InterPro:IPR017887); BEST Arabidopsis thaliana protein
match is: TEOSINTE BRANCHED 1, cycloidea, and PCF family
24 (TAIR:AT1G30210.2); Has 2182 Blast hits to 1888
proteins in 369 species: Archae - 0; Bacteria - 6; Metazoa
- 128; Fungi - 15; Plants - 1699; Viruses - 0; Other
Eukaryotes - 334 (source: NCBI BLink)."
/db_xref="GeneID:827568"
/db_xref="TAIR:AT4G18390"
/db_xref="Araport:AT4G18390"
ORIGIN
1 migdlmknnn ngdvvdnevn nrlsrwhhns sriirvsras ggkdrhskvl tskgprdrrv
61 rlsvstalqf ydlqdrlgyd qpskavewli kaaedsisel pslnnthfpt ddenhqnqtl
121 ttvaanslsk sacssnsdts knssglslsr selrdkarer arertaketk erdhnhtsft
181 dllnsgsdpv nsnrqwmasa pssspmeyfs sglilgsgqq thfpistnsh pfssisdhhh
241 hhphhqhqef sfvpdhlisp aesnggafnl dfnmstpsga gaavsaasgg gfsgfnrgtl
301 qsnstnqhqs flanlqrfpt sesgggpqfl fgalpaenhh hnhqfqlyye ngcrnssehk
361 gkgkn
//