U.S. flag

An official website of the United States government

MAG: hypothetical protein UX00_C0003G0115 [Microgenomates group bacterium GW2011_GWB1_45_17]

GenBank: KKT98443.1

Identical Proteins FASTA Graphics 

LOCUS       KKT98443                 224 aa            linear   ENV 07-MAY-2015
DEFINITION  MAG: hypothetical protein UX00_C0003G0115 [Microgenomates group
            bacterium GW2011_GWB1_45_17].
ACCESSION   KKT98443
VERSION     KKT98443.1
DBLINK      BioProject: PRJNA273161
            BioSample: SAMN03319831
DBSOURCE    accession LCKN01000003.1
KEYWORDS    ENV; Metagenome Assembled Genome; MAG.
SOURCE      Microgenomates group bacterium GW2011_GWB1_45_17 (groundwater
            metagenome)
  ORGANISM  Microgenomates group bacterium GW2011_GWB1_45_17
            Bacteria.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Brown,C.T., Hug,L.A., Thomas,B.C., Sharon,I., Castelle,C.J.,
            Singh,A., Wilkins,M.J., Williams,K.H. and Banfield,J.F.
  TITLE     rRNA introns, odd ribosomes, and small enigmatic genomes across a
            large radiation of phyla
  JOURNAL   Nature (2015) In press
REFERENCE   2  (residues 1 to 224)
  AUTHORS   Brown,C.T., Hug,L.A., Thomas,B.C., Sharon,I., Castelle,C.J.,
            Singh,A., Wilkins,M.J., Williams,K.H. and Banfield,J.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAY-2015) Earth and Planetary Science, University of
            California - Berkeley, 307 McCone Hall, Berkeley, CA 94720, USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: idba_ud v. 1.1
            Genome Coverage       :: 17.87x
            Sequencing Technology :: Illumina HiSeq2000
            ##Genome-Assembly-Data-END##
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Microgenomates group bacterium
                     GW2011_GWB1_45_17"
                     /isolation_source="aquifer sediment"
                     /db_xref="taxon:1618506"
                     /environmental_sample
                     /geo_loc_name="USA: Rifle, CO"
                     /lat_lon="39.5369 N 107.7828 W"
                     /collection_date="Jun-2011"
                     /metagenome_source="groundwater metagenome"
                     /note="metagenomic"
     Protein         1..224
                     /product="hypothetical protein"
     Region          114..224
                     /region_name="DUF5660"
                     /note="Domain of unknown function (DUF5660); pfam18904"
                     /db_xref="CDD:408674"
     CDS             1..224
                     /locus_tag="UX00_C0003G0115"
                     /coded_by="complement(LCKN01000003.1:93510..94184)"
                     /transl_table=11
ORIGIN      
        1 mtqlkppgnt tsqsnggass nnfakallet gghvvqstvd sgvqmaadal gslfgaggsr
       61 lpdtspdnqn entqnnqrng eqsfnqesqe qewkkremrm lrhrevqqve vfnkqdvetk
      121 qkieqlleql kaltkdlsqa drsareaqia vmqgavnpge yhatffekli kvvmllrkkv
      181 qestswieqf nsrksaqkgy wgqfytngtq wsmsqersla tsvg
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.