LOCUS KKS69737 88 aa linear ENV 07-MAY-2015
DEFINITION MAG: 30S ribosomal protein S15 [Candidatus Azambacteria bacterium
GW2011_GWA2_42_62].
ACCESSION KKS69737
VERSION KKS69737.1
DBLINK BioProject: PRJNA273161
BioSample: SAMN03319668
DBSOURCE accession LCEH01000003.1
KEYWORDS ENV; Metagenome Assembled Genome; MAG.
SOURCE Candidatus Azambacteria bacterium GW2011_GWA2_42_62 (groundwater
metagenome)
ORGANISM Candidatus Azambacteria bacterium GW2011_GWA2_42_62
Bacteria; Candidatus Azambacteria.
REFERENCE 1 (residues 1 to 88)
AUTHORS Brown,C.T., Hug,L.A., Thomas,B.C., Sharon,I., Castelle,C.J.,
Singh,A., Wilkins,M.J., Williams,K.H. and Banfield,J.F.
TITLE rRNA introns, odd ribosomes, and small enigmatic genomes across a
large radiation of phyla
JOURNAL Nature (2015) In press
REFERENCE 2 (residues 1 to 88)
AUTHORS Brown,C.T., Hug,L.A., Thomas,B.C., Sharon,I., Castelle,C.J.,
Singh,A., Wilkins,M.J., Williams,K.H. and Banfield,J.F.
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2015) Earth and Planetary Science, University of
California - Berkeley, 307 McCone Hall, Berkeley, CA 94720, USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: idba_ud v. 1.1
Genome Coverage :: 62.74x
Sequencing Technology :: Illumina HiSeq2000
##Genome-Assembly-Data-END##
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..88
/organism="Candidatus Azambacteria bacterium
GW2011_GWA2_42_62"
/isolation_source="aquifer sediment"
/db_xref="taxon:1618612"
/environmental_sample
/geo_loc_name="USA: Rifle, CO"
/lat_lon="39.5369 N 107.7828 W"
/collection_date="Jun-2011"
/metagenome_source="groundwater metagenome"
/note="metagenomic"
Protein 1..88
/product="30S ribosomal protein S15"
Region 1..88
/region_name="rpsO"
/note="30S ribosomal protein S15; Reviewed; PRK05626"
/db_xref="CDD:180170"
Site order(7,24,27,34,38,41,45,47..48,50..51,64,68)
/site_type="other"
/note="16S/18S rRNA binding site [nucleotide binding]"
/db_xref="CDD:238213"
Site order(29,32..33,36,39,79,83)
/site_type="other"
/note="S13e-L30e interaction site [polypeptide binding]"
/db_xref="CDD:238213"
Site order(59,63,84..85)
/site_type="other"
/note="25S rRNA binding site [nucleotide binding]"
/db_xref="CDD:238213"
CDS 1..88
/locus_tag="UV39_C0003G0014"
/coded_by="LCEH01000003.1:10316..10582"
/transl_table=11
ORIGIN
1 mlktkvkski iaehkihdtd tgsvevqtai lskaidqlak hlkknpkdnh srrgllgmvs
61 krkrllnylv kedekrhgal ikkiglkk
//