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MAG: 30S ribosomal protein S15 [Candidatus Azambacteria bacterium GW2011_GWA2_42_62]

GenBank: KKS69737.1

Identical Proteins FASTA Graphics 

LOCUS       KKS69737                  88 aa            linear   ENV 07-MAY-2015
DEFINITION  MAG: 30S ribosomal protein S15 [Candidatus Azambacteria bacterium
            GW2011_GWA2_42_62].
ACCESSION   KKS69737
VERSION     KKS69737.1
DBLINK      BioProject: PRJNA273161
            BioSample: SAMN03319668
DBSOURCE    accession LCEH01000003.1
KEYWORDS    ENV; Metagenome Assembled Genome; MAG.
SOURCE      Candidatus Azambacteria bacterium GW2011_GWA2_42_62 (groundwater
            metagenome)
  ORGANISM  Candidatus Azambacteria bacterium GW2011_GWA2_42_62
            Bacteria; Candidatus Azambacteria.
REFERENCE   1  (residues 1 to 88)
  AUTHORS   Brown,C.T., Hug,L.A., Thomas,B.C., Sharon,I., Castelle,C.J.,
            Singh,A., Wilkins,M.J., Williams,K.H. and Banfield,J.F.
  TITLE     rRNA introns, odd ribosomes, and small enigmatic genomes across a
            large radiation of phyla
  JOURNAL   Nature (2015) In press
REFERENCE   2  (residues 1 to 88)
  AUTHORS   Brown,C.T., Hug,L.A., Thomas,B.C., Sharon,I., Castelle,C.J.,
            Singh,A., Wilkins,M.J., Williams,K.H. and Banfield,J.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAY-2015) Earth and Planetary Science, University of
            California - Berkeley, 307 McCone Hall, Berkeley, CA 94720, USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: idba_ud v. 1.1
            Genome Coverage       :: 62.74x
            Sequencing Technology :: Illumina HiSeq2000
            ##Genome-Assembly-Data-END##
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Candidatus Azambacteria bacterium
                     GW2011_GWA2_42_62"
                     /isolation_source="aquifer sediment"
                     /db_xref="taxon:1618612"
                     /environmental_sample
                     /geo_loc_name="USA: Rifle, CO"
                     /lat_lon="39.5369 N 107.7828 W"
                     /collection_date="Jun-2011"
                     /metagenome_source="groundwater metagenome"
                     /note="metagenomic"
     Protein         1..88
                     /product="30S ribosomal protein S15"
     Region          1..88
                     /region_name="rpsO"
                     /note="30S ribosomal protein S15; Reviewed; PRK05626"
                     /db_xref="CDD:180170"
     Site            order(7,24,27,34,38,41,45,47..48,50..51,64,68)
                     /site_type="other"
                     /note="16S/18S rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:238213"
     Site            order(29,32..33,36,39,79,83)
                     /site_type="other"
                     /note="S13e-L30e interaction site [polypeptide binding]"
                     /db_xref="CDD:238213"
     Site            order(59,63,84..85)
                     /site_type="other"
                     /note="25S rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:238213"
     CDS             1..88
                     /locus_tag="UV39_C0003G0014"
                     /coded_by="LCEH01000003.1:10316..10582"
                     /transl_table=11
ORIGIN      
        1 mlktkvkski iaehkihdtd tgsvevqtai lskaidqlak hlkknpkdnh srrgllgmvs
       61 krkrllnylv kedekrhgal ikkiglkk
//
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