LOCUS EFJ36889 795 aa linear PLN 25-JUL-2016
DEFINITION hypothetical protein SELMODRAFT_437944 [Selaginella
moellendorffii].
ACCESSION EFJ36889
VERSION EFJ36889.1
DBLINK BioProject: PRJNA13078
BioSample: SAMN02981255
DBSOURCE accession GL377566.1
KEYWORDS .
SOURCE Selaginella moellendorffii
ORGANISM Selaginella moellendorffii
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
REFERENCE 1 (residues 1 to 795)
AUTHORS Banks,J.A., Nishiyama,T., Hasebe,M., Bowman,J.L., Gribskov,M.,
dePamphilis,C., Albert,V.A., Aono,N., Aoyama,T., Ambrose,B.A.,
Ashton,N.W., Axtell,M.J., Barker,E., Barker,M.S., Bennetzen,J.L.,
Bonawitz,N.D., Chapple,C., Cheng,C., Correa,L.G., Dacre,M.,
DeBarry,J., Dreyer,I., Elias,M., Engstrom,E.M., Estelle,M.,
Feng,L., Finet,C., Floyd,S.K., Frommer,W.B., Fujita,T., Gramzow,L.,
Gutensohn,M., Harholt,J., Hattori,M., Heyl,A., Hirai,T.,
Hiwatashi,Y., Ishikawa,M., Iwata,M., Karol,K.G., Koehler,B.,
Kolukisaoglu,U., Kubo,M., Kurata,T., Lalonde,S., Li,K., Li,Y.,
Litt,A., Lyons,E., Manning,G., Maruyama,T., Michael,T.P.,
Mikami,K., Miyazaki,S., Morinaga,S., Murata,T., Mueller-Roeber,B.,
Nelson,D.R., Obara,M., Oguri,Y., Olmstead,R.G., Onodera,N.,
Petersen,B.L., Pils,B., Prigge,M., Rensing,S.A., Riano-Pachon,D.M.,
Roberts,A.W., Sato,Y., Scheller,H.V., Schulz,B., Schulz,C.,
Shakirov,E.V., Shibagaki,N., Shinohara,N., Shippen,D.E.,
Sorensen,I., Sotooka,R., Sugimoto,N., Sugita,M., Sumikawa,N.,
Tanurdzic,M., Theissen,G., Ulvskov,P., Wakazuki,S., Weng,J.K.,
Willats,W.W., Wipf,D., Wolf,P.G., Yang,L., Zimmer,A.D., Zhu,Q.,
Mitros,T., Hellsten,U., Loque,D., Otillar,R., Salamov,A.,
Schmutz,J., Shapiro,H., Lindquist,E., Lucas,S., Rokhsar,D. and
Grigoriev,I.V.
TITLE The Selaginella genome identifies genetic changes associated with
the evolution of vascular plants
JOURNAL Science 332 (6032), 960-963 (2011)
PUBMED 21551031
REFERENCE 2 (residues 1 to 795)
AUTHORS Grigoriev,I.V., Otillar,R., Schmutz,J., Salamov,A., Lindquist,E.,
Lucas,S., Pitluck,S., Shapiro,H., Rokhsar,D.S., Hasebe,M.,
Bowman,J., dePamphils,C., Gribskov,M. and Banks,J.
CONSRTM Selaginella Consortium
TITLE Direct Submission
JOURNAL Submitted (22-JAN-2010) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..795
/organism="Selaginella moellendorffii"
/db_xref="taxon:88036"
/chromosome="Unknown"
Protein 1..795
/product="hypothetical protein"
Region 139..241
/region_name="B3"
/note="B3 DNA binding domain; pfam02362"
/db_xref="CDD:396783"
Site order(141,144,152,155,157,192,203,205..206,208..209)
/site_type="other"
/note="putative DNA binding site [nucleotide binding]"
/db_xref="CDD:197383"
Region 266..348
/region_name="Auxin_resp"
/note="Auxin response factor; pfam06507"
/db_xref="CDD:428981"
Region <667..743
/region_name="AUX_IAA"
/note="AUX/IAA family; pfam02309"
/db_xref="CDD:460529"
CDS 1..795
/gene="ETT2-1"
/locus_tag="SELMODRAFT_437944"
/coded_by="join(GL377566.1:4121931..4122012,
GL377566.1:4122138..4122250,GL377566.1:4122312..4122407,
GL377566.1:4122475..4122531,GL377566.1:4122579..4122734,
GL377566.1:4122796..4122971,GL377566.1:4123027..4123194,
GL377566.1:4123253..4123372,GL377566.1:4123425..4123500,
GL377566.1:4123550..4124506,GL377566.1:4124571..4124761,
GL377566.1:4124881..4125076)"
/note="predicted protein;
GO_component: GO:5634 - nucleus;
GO_function: GO:3677 - DNA binding;
GO_process: GO:6445; regulation of transcription,
DNA-dependent - regulation of translation [PMID 6355]"
/db_xref="InterPro:IPR003311"
/db_xref="InterPro:IPR003340"
/db_xref="InterPro:IPR010525"
/db_xref="JGIDB:Selmo1_437944"
ORIGIN
1 mlsssqtygq lgtmmhrptp qrpqpnhgnt naldsevwha cagplvclpr vgdrvvyfpq
61 ghieqvaast nqsadmqmph ynlpsqiycr llnltlgadr etdevfaqmt lvpeneqgdq
121 sidtedelsp cpkrklsmfc knltssdtst hggfsvprra aeeclppldy qqsppaqelv
181 akdlhgvewk frhiyrgqpr rhllttgwsv fvsqkklvag davlflrgdn gelrigvrra
241 vrqqnsvtss sllsshsmhl gvlaaaahav stktmftify npraspaefv vpyhkyvkaf
301 thnlsvgmrf kmrfeteess errymgtitg vgdidsdrwi nskwrclqvg wdeqtanerq
361 ervspweiep fiapnvanpp ttqrvkkfrp ntpanefptg knnsdsaqam hmralqgsha
421 lgmpskeeeg lrgsspfavw pynrddlkge swiqlrtada pvmdmfgnii apagrhmdss
481 nvemhqqlrh clqqlrdqks chfdasnsqv qlsprlssfs pyqqgdaadl hlstprptnh
541 gvvrdsswls plgptqtdaq ayvaadttls mqfsksemtt ermhidsnpd heprehscki
601 fgfslieksp paasrnpeea rlnpsrggeq mtrcsgragp sagngslehe rcasrpasaw
661 slrtctkvhl qgaavgravd lskfscysel llelqqlfgl dnalddpdsg wqvvytdneg
721 dmllvgddpw qefcnmvrni rilspaevek ltqgalgksa vveeepstrd asklsdhqds
781 ssppaistkg aasdl
//