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GenBank: BAB08804.1
Identical Proteins FASTA Graphics
LOCUS BAB08804 559 aa linear PLN 14-FEB-2004 DEFINITION auxin-independent growth promoter-like protein [Arabidopsis thaliana]. ACCESSION BAB08804 VERSION BAB08804.1 DBSOURCE accession AB007649.1 KEYWORDS . SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 AUTHORS Nakamura,Y., Sato,S., Kaneko,T., Kotani,H., Asamizu,E., Miyajima,N. and Tabata,S. TITLE Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence features of the regions of 1,191,918 bp covered by seventeen physically assigned P1 clones JOURNAL DNA Res. 4 (6), 401-414 (1997) PUBMED 9501997 REFERENCE 2 (residues 1 to 559) AUTHORS Nakamura,Y. TITLE Direct Submission JOURNAL Submitted (03-OCT-1997) Yasukazu Nakamura, Kazusa DNA Research Institute, Department of Plant Gene Research; 1532-3, Yana, Kisarazu, Chiba 292-0812, Japan (E-mail:ynakamu@kazusa.or.jp, Tel:81-438-52-3935, Fax:81-438-52-3934) COMMENT Address for correspondence: kaos@kazusa.or.jp For the latest information on annotation of this clone, please see http://www.kazusa.or.jp/kaos/cgi-bin/agd_graph.cgi?c=MLE2 Genes with similarity to proteins in the databases are described in 'product' or 'note' qualifiers. Genes that have no significant protein similarity are described as 'unknown protein'. The software programs used to predict genes include: Grail (Informatics Group, Oak Ridge National Laboratory, http://compbio.ornl.gov/Grail-1.3/), GENSCAN (Chris Burge, MIT, http://CCR-081.mit.edu/GENSCAN.html), NetGene2 (S.M. Hebsgaard, et al., CBS, Technical University of Denmark, http://www.cbs.dtu.dk/services/NetGene2/) and SplicePredictor (Volker Brendel, Stanford University, http://gremlin1.zool.iastate.edu/cgi-bin/sp.cgi). Genes encoding tRNAs are predicted by tRNAscan-SE (Sean Eddy, Washington University School of Medicine, St. Louis, http://genome.wustl.edu/eddy/tRNAscan-SE/). This sequence may not be the entire insert of this clone. It may be shorter because we remove overlaps between neighboring submissions. The 5' clone is K9H21 and the 3' clone is MBK5. FEATURES Location/Qualifiers source 1..559 /organism="Arabidopsis thaliana" /db_xref="taxon:3702" /chromosome="5" /clone="MLE2" /clone_lib="Mitsui P1" /ecotype="Columbia" Protein 1..559 /product="auxin-independent growth promoter-like protein" Region 167..489 /region_name="O-FucT_plant" /note="GDP-fucose protein O-fucosyltransferase, plant specific subfamily; cd11299" /db_xref="CDD:211385" Site order(175..178,331,333,409..411,453,472..474) /site_type="other" /note="GDP-Fucose binding site [chemical binding]" /db_xref="CDD:211385" CDS 1..559 /coded_by="complement(join(AB007649.1:2166..2408, AB007649.1:2476..2734,AB007649.1:2838..3121, AB007649.1:3189..3278,AB007649.1:3360..3528, AB007649.1:3611..4245))" /inference="non-experimental evidence, no additional details recorded" /note="gene_id:MLE2.2" ORIGIN 1 maksmrtikn pfftshppsp ffhlsllfft plkksspryl nhhhqtrcpp pqfflllisl 61 slvfsgisfl tfsldtgsst cvstssassl kffisdvdhr qiltslavsg astlfplpar 121 gghsgnmtee ekefwkqpng egykpcldfs leykkksasv skekkrflvv vvsgglnqqr 181 nqivdavvia mileaalvvp vlqvnrvwgd esefsdlfdv ehfkktlrsd vrivsslpst 241 hlmsrqtien qipwdvspvw irakyfkqln eegllvlkgl dsklaknlpp dlqklrckva 301 fhalrfaapi enlgnkltrr mwiegpyial hlrlekdvwv rtgcltglgs efdriiaetr 361 tsqpryltgr lnltyterrl agfcplnvye iarllkalga psnasiyiag gepfggsral 421 eplakefsnl vtketlahkg ellpytnrss alaaidyivs lssdvfipsh ggnmakamqg 481 nrayvghrkf impnkramlp lmenssvsda elsfltrklh rksqgypesr rgrrdrdvia 541 ypvpecmcrh rkhrsvgff //
Whole sequence Selected region from: to:
Conserved Domains
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