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GEO07864p1, partial [Drosophila melanogaster]

GenBank: ANY27665.1

Identical Proteins FASTA Graphics 

LOCUS       ANY27665                 146 aa            linear   INV 08-AUG-2016
DEFINITION  GEO07864p1, partial [Drosophila melanogaster].
ACCESSION   ANY27665
VERSION     ANY27665.1
DBSOURCE    accession KX531855.1
KEYWORDS    .
SOURCE      Drosophila melanogaster (fruit fly)
  ORGANISM  Drosophila melanogaster
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Wan,K., Booth,B., Spirohn,K., Hao,T., Hu,Y., Calderwood,M.,
            Hill,D., Mohr,S., Vidal,M., Celniker,S. and Perrimon,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-JUL-2016) Berkeley Drosophila Genome Project,
            Lawrence Berkeley National Laboratory, One Cyclotron Road,
            Berkeley, CA 94720, USA
COMMENT     This ORF sequence was generated by the FlyBi project for
            large-scale mapping of binary interactions in Drosophila. FlyBi is
            a collaboration among the Berkeley Drosophila Genome Project (S.
            Celniker), Center for Cancer Systems Biology (M. Vidal), and
            Drosophila RNAi Screening Center (N. Perrimon). The project was
            funded by an NIGMS grant to N. Perrimon, Harvard Medical School,
            Boston, MA 02115. The ORF was sequenced as a pool using the
            Illumina HiSeq as part of a high-throughput process generated by
            PCR amplification of BDGP Drosophila Gene Collection open reading
            frame clones followed by cloning into the Gateway recombinational
            cloning vector pDONR223. This ORF was amplified, without a
            stop-codon (to allow fusion with C-terminal tag), from the parent
            clone with accession number AY071463. Clone structure of the ORF
            and flanking sequence is as follows: 5' - caactt tgtacaaaaa
            agttggcacc -ORF- ttgccaactt tcttgtacaa agttg - 3'. If you request
            the clone from a repository, we recommend single-colony isolation
            and sequence validation. For more information about the FlyBi
            project, including information regarding distribution of FlyBi
            clones by repositories, please see http://flybi.hms.harvard.edu/
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Drosophila melanogaster"
                     /db_xref="taxon:7227"
                     /clone="GEO07864"
     Protein         1..>146
                     /product="GEO07864p1"
     Region          52..137
                     /region_name="DUF733"
                     /note="Protein of unknown function (DUF733); pfam05306"
                     /db_xref="CDD:428418"
     CDS             1..146
                     /coded_by="KX531855.1:1..>438"
                     /note="longest ORF"
ORIGIN      
        1 midqhkrshk sekssrksgk khsdkphkvk thdplkkqkk ralkklrrks atvnfpyqlf
       61 lyrqelrras adfsylrlsk akivltsqli akkmgscnpd csvdelkels revqfqkrlc
      121 hqverlqqfr qlgltemiln gkkttl
//
1..146
/coded_by="KX531855.1:1..>438"
/note="longest ORF"
Feature ANY27665 : 1 segment
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Reference sequence information

  • RefSeq protein
    See the reference protein sequence for SoxNeuro Co-Factor (NP_648635.1).

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