LOCUS AFJ71920 473 aa linear PRI 04-NOV-2014
DEFINITION reticulon-4 receptor precursor [Macaca mulatta].
ACCESSION AFJ71920
VERSION AFJ71920.1
DBLINK BioProject: PRJNA77627
Sequence Read Archive: SRR353360
DBSOURCE accession JV667257.1
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Macaca mulatta (Rhesus monkey)
ORGANISM Macaca mulatta
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Cercopithecidae; Cercopithecinae; Macaca.
REFERENCE 1 (residues 1 to 473)
AUTHORS Zimin,A.V., Cornish,A.S., Maudhoo,M.D., Gibbs,R.M., Zhang,X.,
Pandey,S., Meehan,D.T., Wipfler,K., Bosinger,S.E., Johnson,Z.P.,
Tharp,G.K., Marcais,G., Roberts,M., Ferguson,B., Fox,H.S.,
Treangen,T., Salzberg,S.L., Yorke,J.A. and Norgren,R.B. Jr.
TITLE A new rhesus macaque assembly and annotation for next-generation
sequencing analyses
JOURNAL Biol. Direct 9 (1), 20 (2014)
PUBMED 25319552
REMARK Publication Status: Online-Only
REFERENCE 2 (residues 1 to 473)
AUTHORS Pandey,S., Maudhoo,M.D., Guda,C., Ferguson,B., Fox,H. and
Norgren,R.B.
TITLE Direct Submission
JOURNAL Submitted (30-APR-2012) Genetics, Cell Biology and Anatomy,
University of Nebraska Medical Center, 985805 Nebraska Medical
Center, Omaha, NE 68198-5805, USA
COMMENT ##Assembly-Data-START##
Assembly Method :: Velvet v.1.1.05; Oases v.0.1.22
Sequencing Technology :: Illumina
##Assembly-Data-END##
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..473
/organism="Macaca mulatta"
/isolation_source="BF21178"
/db_xref="taxon:9544"
/tissue_type="brain"
/geo_loc_name="India"
Protein 1..473
/product="reticulon-4 receptor precursor"
Region <60..>260
/region_name="LRR"
/note="Leucine-rich repeat (LRR) protein [Transcription];
COG4886"
/db_xref="CDD:443914"
Region 60..82
/region_name="leucine-rich repeat"
/note="leucine-rich repeat [structural motif]"
/db_xref="CDD:275380"
Region 83..106
/region_name="leucine-rich repeat"
/note="leucine-rich repeat [structural motif]"
/db_xref="CDD:275380"
Region 107..131
/region_name="leucine-rich repeat"
/note="leucine-rich repeat [structural motif]"
/db_xref="CDD:275380"
Region 132..155
/region_name="leucine-rich repeat"
/note="leucine-rich repeat [structural motif]"
/db_xref="CDD:275380"
Region 156..179
/region_name="leucine-rich repeat"
/note="leucine-rich repeat [structural motif]"
/db_xref="CDD:275380"
Region 180..203
/region_name="leucine-rich repeat"
/note="leucine-rich repeat [structural motif]"
/db_xref="CDD:275380"
Region 204..227
/region_name="leucine-rich repeat"
/note="leucine-rich repeat [structural motif]"
/db_xref="CDD:275380"
Region 228..251
/region_name="leucine-rich repeat"
/note="leucine-rich repeat [structural motif]"
/db_xref="CDD:275380"
CDS 1..473
/gene="RTN4R"
/coded_by="JV667257.1:122..1543"
ORIGIN
1 mkrasaggsr llawvlwlqa wrvaapcpga cvcynepkvt tscpqqglqa vpagipassq
61 riflhgnris hvpaasfrac rnltilwlhs nvlaridaaa faglalleql dlsdnaqlrs
121 vdpatfhglg rlhtlhldrc glqelgpglf rglaalqyly lqdnalqalp ddtfrdlgnl
181 thlflhgnri ssvperafrg lhsldrlllh qnrvahvhph afrdlgrlmt lylfannlsa
241 lpaealaplr alqylrlndn pwvcdcrarp lwawlqkfrg sssevpcslp qrlagrdlkr
301 laandlqgca vatgpyhpiw tgratdeell glpkccqpda adkasvlepg rpasagnalk
361 grvppgdspp gngsgprhin dspfgtlpgs aeppltavrp egseppgfpt sgprrrpgcs
421 rknrtrshcr lgqagsgggg tgdsegsgal pslacslapl glalvlwtvl gpc
//