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AT4g34410/F10M10_180 [Arabidopsis thaliana]

GenBank: AAM52243.1

Identical Proteins FASTA Graphics 

LOCUS       AAM52243                 268 aa            linear   PLN 18-JUN-2002
DEFINITION  AT4g34410/F10M10_180 [Arabidopsis thaliana].
ACCESSION   AAM52243
VERSION     AAM52243.1
DBSOURCE    accession AY120700.1
KEYWORDS    .
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Cheuk,R., Chen,H., Kim,C.J., Shinn,P., Banh,J., Bowser,L.,
            Carninci,P., Chang,E., Dale,J.M., Goldsmith,A.D., Hayashizaki,Y.,
            Ishida,J., Jones,T., Kamiya,A., Karlin-Neumann,G., Kawai,J.,
            Lam,B., Lee,J.M., Lin,J., Miranda,M., Narusaka,M., Nguyen,M.,
            Onodera,C.S., Palm,C.J., Quach,H.L., Sakurai,T., Satou,M., Seki,M.,
            Southwick,A., Tang,C.C., Toriumi,M., Wu,H.C., Yamada,K.,
            Yamamura,Y., Yu,G., Yu,S., Shinozaki,K., Davis,R.W., Theologis,A.
            and Ecker,J.R.
  TITLE     Arabidopsis ORF clones
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 268)
  AUTHORS   Cheuk,R., Chen,H., Kim,C.J., Shinn,P., Banh,J., Bowser,L.,
            Carninci,P., Chang,E., Dale,J.M., Goldsmith,A.D., Hayashizaki,Y.,
            Ishida,J., Jones,T., Kamiya,A., Karlin-Neumann,G., Kawai,J.,
            Lam,B., Lee,J.M., Lin,J., Miranda,M., Narusaka,M., Nguyen,M.,
            Onodera,C.S., Palm,C.J., Quach,H.L., Sakurai,T., Satou,M., Seki,M.,
            Southwick,A., Tang,C.C., Toriumi,M., Wu,H.C., Yamada,K.,
            Yamamura,Y., Yu,G., Yu,S., Shinozaki,K., Davis,R.W., Theologis,A.
            and Ecker,J.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JUN-2002) Salk Institute Genomic Analysis Laboratory
            (SIGnAL), Plant Biology Laboratory, The Salk Institute for
            Biological Studies, 10010 N. Torrey Pines Road, La Jolla, CA 92037,
            USA
COMMENT     RIKEN Genomic Sciences Center (GSC) members carried out the
            collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
            Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
            Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
            Hayashizaki,Y. and Shinozaki,K.
            
            The Salk, Stanford, PGEC (SSP) Consortium members constructed and
            sequenced the pUNI (ORF) clones using the RAFL cDNAs: Cheuk,R.,
            Chen,H., Kim,C.J., Shinn,P., Banh,J. Bowser,L., Chan,M.M.,
            Chang,E., Dale,J.M., Deng, J.M., Goldsmith,A.D., Jones,T.,
            Karlin-Neumann,G., Lam,B., Lee,J.M., Lin,J., Miranda,M., Nguyen,M.,
            Onodera,C.S., Palm,C.J., Quach,H.L., Southwick,A., Tang,C.C.,
            Toriumi,M., Wu,H.C., Yamada,K., Yamamura, Y., Yu,G., Davis,R.W.,
            Theologis,A., and Ecker,J.R.
            
            Cheuk,R. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
            this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
            contributed equally to this work as PIs.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="4"
                     /clone="U21120"
                     /ecotype="Columbia"
                     /note="This clone is in pUNI 51"
     Protein         1..268
                     /product="AT4g34410/F10M10_180"
     Region          136..198
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(137..138,140,142,144,146,150,152,159,161,164)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..268
                     /coded_by="AY120700.1:1..807"
                     /note="transcription factor protein"
ORIGIN      
        1 mhypnnrtef vgapaptryq keqlspeqel svivsalqhv isgenetapc qgfssdstvi
       61 sagmprldsd tcqvcriegc lgcnyffapn qrieknhqqe eeitsssnrr resspvakka
      121 egggkirkrk nkkngyrgvr qrpwgkfaae irdpkratrv wlgtfetaed aaraydraai
      181 gfrgprakln fpfvdytssv sspvaaddig akasasasvs atdsveaeqw nggggdcnme
      241 ewmnmmmmmd fgngdssdsg ntiadmfq
//
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Reference sequence information

  • RefSeq protein
    See the reference protein sequence for redox responsive transcription factor 1 (NP_195167.1).

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