LOCUS AAM47886 329 aa linear PLN 10-JUN-2002
DEFINITION peroxidase [Arabidopsis thaliana].
ACCESSION AAM47886
VERSION AAM47886.1
DBSOURCE accession AY114567.1
KEYWORDS .
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 329)
AUTHORS Tripp,M., Southwick,A., Karlin-Neumann,G., Nguyen,M., Miranda,M.,
Palm,C.J., Bowser,L., Jones,T., Banh,J., Carninci,P., Chen,H.,
Cheuk,R., Chung,M.K., Hayashizaki,Y., Ishida,J., Kamiya,A.,
Kawai,J., Kim,C., Lin,J., Liu,S.X., Narusaka,M., Pham,P.K.,
Sakano,H., Sakurai,T., Satou,M., Seki,M., Shinn,P., Yamada,K.,
Shinozaki,K., Ecker,J., Theologis,A. and Davis,R.W.
TITLE Direct Submission
JOURNAL Submitted (22-MAY-2002) DNA Sequencing and Technology Center,
Stanford University, 855 California Avenue, Palo Alto, CA 94304,
USA
COMMENT e-mail for correspondence: arab@sequence.stanford.edu
The RIKEN Genomic Sciences Center (GSC) members carried out the
collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J.,
Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai, J.,
Hayashizaki,Y. and Shinozaki,K.
The Salk, Stanford, PGEC (SSP) Consortium members constructed and
sequenced the pUNI (ORF) clones using the RAFL cDNAs: Tripp,M.,
Nguyen,M., Southwick,A., Karlin-Neumann,G., Lam,B., Miranda,M.,
Palm,C.J., Bowser,L., Jones,T., Banh,J., Chen,H., Cheuk,R.,
Chung,M.K., Kim,C., Lin,J., Liu,S.X., Pham,P.K., Sakano,H.,
Shinn,P., Yamada,K., Ecker,J., Theologis,A. and Davis,R.W.
Tripp,M, (SSP/Stanford) and Seki,M. (RIKEN GSC) contributed equally
to this work. Shinozaki,K. (RIKEN GSC) and Davis,R.W.
(SSP/Stanford) contributed equally to this work as PIs.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..329
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="3"
/clone="U16040"
/ecotype="Columbia"
/note="This clone is in pENTR/SD-dTopo This is a cloned
PCR product using RIKEN clone RAFL05-14-B21 (AY072326) as
a template"
Protein 1..329
/product="peroxidase"
Region 28..326
/region_name="secretory_peroxidase"
/note="Horseradish peroxidase and related secretory plant
peroxidases; cd00693"
/db_xref="CDD:173827"
Site order(58,61..62,64..65,68..69,98,100,164..167,173,177,187,
190..191,193..194,196..200,202..203,246,269,271,304)
/site_type="active"
/db_xref="CDD:173827"
Site order(58,61..62,64..65,68,96,98,100,164..166,173,177,187,
190..191,193..194,196..200,203,246,269,271,304)
/site_type="other"
/note="heme binding site [chemical binding]"
/db_xref="CDD:173827"
Site order(65,94..95,164..167,200,202..203)
/site_type="other"
/note="substrate binding site [chemical binding]"
/db_xref="CDD:173827"
Site order(70,73,77,79,195,247,250,253,255)
/site_type="other"
/note="calcium binding sites [ion binding]"
/db_xref="CDD:173827"
CDS 1..329
/gene="At3g21770"
/gene_synonym="MSD21.8"
/coded_by="AY114567.1:1..990"
ORIGIN
1 mktmtqlnia vvvvvtvlig mlrsseaqlq mnfyakscpn aekiisdhiq nhihngpsla
61 aplirmhfhd cfvrgcdgsv linstsgnae rdappnltlr gfgfverika llekvcpktv
121 scadiialta rdavvatggp swsvptgrrd grisnkteat nnippptsnf ttlqrlfknq
181 glnlkdlvll sgahtigvsh cssmntrlyn fsttvkqdps ldsqyaanlk ankckslndn
241 stilemdpgs srsfdlsyyr lvlkrrglfq sdsalttnsa tlkvindlvn gsekkffkaf
301 aksmekmgrv kvktgsagvi rtrcsvags
//