LOCUS AAM20233 558 aa linear PLN 18-SEP-2002
DEFINITION putative zeta-carotene desaturase precursor [Arabidopsis thaliana].
ACCESSION AAM20233
VERSION AAM20233.1
DBSOURCE accession AY096583.1
KEYWORDS .
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 558)
AUTHORS Yamada,K., Banh,J., Chan,M.M., Chang,C.H., Chang,E., Dale,J.M.,
Deng,J.M., Goldsmith,A.D., Lee,J.M., Onodera,C.S., Quach,H.L.,
Tang,C., Toriumi,M., Wu,H.C., Yamamura,Y., Yu,G., Bowser,L.,
Carninci,P., Chen,H., Cheuk,R., Hayashizaki,Y., Ishida,J.,
Jones,T., Kamiya,A., Karlin-Neumann,G., Kawai,J., Kim,C., Lam,B.,
Lin,J., Meyers,M.C., Miranda,M., Narusaka,M., Nguyen,M., Palm,C.J.,
Sakurai,T., Satou,M., Seki,M., Shinn,P., Southwick,A.,
Shinozaki,K., Davis,R.W., Ecker,J.R. and Theologis,A.
TITLE Arabidopsis Open Reading Frame (ORF) Clones
JOURNAL Unpublished
REFERENCE 2 (residues 1 to 558)
AUTHORS Yamada,K., Banh,J., Chan,M.M., Chang,C.H., Chang,E., Dale,J.M.,
Deng,J.M., Goldsmith,A.D., Lee,J.M., Onodera,C.S., Quach,H.L.,
Tang,C.C., Toriumi,M., Wu,H.C., Yamamura,Y., Yu,G., Bowser,L.,
Carninci,P., Chen,H., Cheuk,R., Hayashizaki,Y., Ishida,J.,
Jones,T., Kamiya,A., Karlin-Neumann,G., Kawai,J., Kim,C., Lam,B.,
Lin,J., Meyers,M.C., Miranda,M., Narusaka,M., Nguyen,M., Palm,C.J.,
Sakurai,T., Satou,M., Seki,M., Shinn,P., Southwick,A.,
Shinozaki,K., Davis,R.W., Ecker,J.R. and Theologis,A.
TITLE Direct Submission
JOURNAL Submitted (16-APR-2002) Plant Gene Expression Center, 800 Buchanan
Street, Albany, CA 94710, USA
COMMENT The RIKEN Genomic Sciences Center (GSC) members carried out the
collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J.,
Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai, J.,
Hayashizaki,Y. and Shinozaki,K.
The Salk, Stanford, PGEC (SSP) Consortium members constructed and
sequenced the pUNI (ORF) clones using the RAFL cDNAs: Yamada,K.,
Banh,J., Chan,M.M., Chang,C.H., Chang,E., Dale,J.M., Deng,J.M.,
Goldsmith,A.D., Lee,J.M., Onodera,C.S., Quach,H.L., Tang,C.C.,
Toriumi,M., Wu,H.C., Yamamura,Y., Yu,G., Bowser,L., Chen,H.,
Cheuk,R., Jones,T., Karlin-Neumann,G., Kim,C., Lam,B., Lin,J.,
Meyers,M.C., Miranda,M., Nguyen,M., Palm,C.J., Shinn,P.,
Southwick,A., Davis,R.W., Ecker,J.R. and Theologis,A.
Yamada,K. (SSP/PGEC) and Seki, M. (RIKEN GSC) contributed equally
to this work. Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP
/PGEC) contributed equally to this work as PIs.
Annotation is based on the January 2002 version of the Arabidopsis
genome submitted to GenBank.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..558
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="3"
/clone="U19281"
/ecotype="Columbia"
/note="This clone is in pUNI 51."
Protein 1..558
/product="putative zeta-carotene desaturase precursor"
Region 1..550
/region_name="PLN02487"
/note="zeta-carotene desaturase"
/db_xref="CDD:215268"
CDS 1..558
/gene="At3g04870"
/coded_by="AY096583.1:1..1677"
/experiment="experimental evidence, no additional details
recorded"
ORIGIN
1 massvvfaat gslsvpplks rrfyvnssld sdvsdmsvna pkglfppepv pykgpklkva
61 iigaglagms tavelldqgh evdiydsrtf iggkvgsfvd rrgnhiemgl hvffgcynnl
121 frlmkkvgae knllvkdhth tfinkdgtig eldfrfpvga pihgiraflv tnqlkpydkl
181 rnslalalsp vvkalvdpdg amrdirnlds isfsdwflsk ggtrasiqrm wdpvayalgf
241 idcdnmsarc mltifslfat kteasllrml kgspdvylsg pikqyitdrg grihlrwgcr
301 eilydksadg etyvtglais katnkkivka dvyvaacdvp gikrllpkew resrffndiy
361 elegvpvvtv qlryngwvte lqdielarql kravgldnll ytpdadfscf adlalaspad
421 yyiegqgtll qcvltpgdpy mrmpndkiie kvamqvtelf pssrglevtw ssvvkiaqsl
481 yreapgkdpf rpdqktpikn fflagsytkq dyidsmegat lsgrqassyi cdageelael
541 nkklsssata vpdelslv
//