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Zfp426l protein, partial [Rattus norvegicus]

GenBank: AAH79105.1

Identical Proteins FASTA Graphics 

LOCUS       AAH79105                 411 aa            linear   ROD 26-JUL-2016
DEFINITION  Zfp426l protein, partial [Rattus norvegicus].
ACCESSION   AAH79105
VERSION     AAH79105.1
DBSOURCE    accession BC079105.1
KEYWORDS    .
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 411)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (residues 1 to 411)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-AUG-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Howard Jacobs
            cDNA Library Preparation: Express Genomics
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 183 Row: k Column: 12
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Hexamer frequency ORF
            analysis, Similarity but not identity to protein.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Rattus norvegicus"
                     /db_xref="taxon:10116"
                     /clone="IMAGE:7125187"
                     /tissue_type="Lung, rat (Brown Norway)"
                     /clone_lib="NIH_MGC_232"
                     /lab_host="DH10B"
                     /note="Vector: pExpress1"
     Protein         1..>411
                     /product="Zfp426l protein"
     Region          41..97
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          265..281
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          289..309
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <317..366
                     /region_name="PHA00733"
                     /note="hypothetical protein"
                     /db_xref="CDD:177301"
     Region          317..337
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(322,324,326,328..329,332..333,336,350,352,356..357,
                     360..361,364,378,380,382,384..385,388..389,392)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          344..365
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          345..365
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          371..393
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          373..393
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..411
                     /gene="Zfp426l"
                     /gene_synonym="Zfp426"
                     /coded_by="BC079105.1:444..>1676"
                     /db_xref="GeneID:367034"
                     /db_xref="RGD:1308643"
ORIGIN      
        1 maaidlshgl lprepiyvye anievegtvt dnqancyqds vtfddvavef tpdewtlldl
       61 tqknlyrevm lenyenltsv gcqffipslt pwlkqeelgv aesalpqqle lqptiddsel
      121 enyfrmqsss atemvgdssl qeqsgnhseg dlrdskpcgn vlgeqlclnt evstqsqgys
      181 secnwygkdi lsllketstg qnvselnqcg klfsltpnim ypststnekp fectdcetaf
      241 fnqsyfqpdm rphnggepyd wskfgngfih ptslamhlpi lnarnpykfe ecgkdfqyfa
      301 clnnpmgmct gekfcdckec wkaftvsshl tqyvsihtee kskvckicgk sfanysrlsa
      361 hvkthneekp fvckecgkaf knmsylndhv rihtgiksyk ckkkkkkkkk k
//
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