LOCUS AF326867_1 162 aa linear PLN 18-SEP-2002
DEFINITION putative RING zinc finger protein [Arabidopsis thaliana].
ACCESSION AAG41449
VERSION AAG41449.1
DBSOURCE accession AF326867.1
KEYWORDS .
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 162)
AUTHORS Yamada,K., Liu,S.X., Sakano,H., Pham,P.K., Banh,J., Chung,M.K.,
Goldsmith,A.D., Lee,J.M., Quach,H.L., Toriumi,M., Yu,G., Bowser,L.,
Carninci,P., Chen,H., Cheuk,R., Hayashizaki,Y., Ishida,J.,
Jones,T., Kamiya,A., Karlin-Neumann,G., Kawai,J., Kim,C., Lam,B.,
Lin,J., Miranda,M., Narusaka,M., Nguyen,M., Palm,C.J., Sakurai,T.,
Satou,M., Seki,M., Shinn,P., Southwick,A., Shinozaki,K.,
Davis,R.W., Ecker,J.R. and Theologis,A.
TITLE Arabidopsis Full Length cDNA Clones
JOURNAL Unpublished
REFERENCE 2 (residues 1 to 162)
AUTHORS Yamada,K., Liu,S.X., Sakano,H., Pham,P.K., Banh,J., Chung,M.K.,
Goldsmith,A.D., Lee,J.M., Quach,H.L., Toriumi,M., Yu,G., Bowser,L.,
Carninci,P., Chen,H., Cheuk,R., Hayashizaki,Y., Ishida,J.,
Jones,T., Kamiya,A., Karlin-Neumann,G., Kawai,J., Kim,C., Lam,B.,
Lin,J., Miranda,M., Narusaka,M., Nguyen,M., Palm,C.J., Sakurai,T.,
Satou,M., Seki,M., Shinn,P., Southwick,A., Shinozaki,K.,
Davis,R.W., Ecker,J.R. and Theologis,A.
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2000) Plant Gene Expression Center, 800 Buchanan
Street, Albany, CA 94710, USA
COMMENT RIKEN Genomic Sciences Center (GSC) members carried out the
collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J.,
Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J.,
Hayashizaki,Y. and Shinozaki,K.
The Salk, Stanford, PGEC (SSP) Consortium members carried out the
sequencing and annotation of the RAFL cDNAs: Yamada,K., Liu,S.X.,
Sakano,H., Pham,P.K., Banh,J., Chung,M.K., Goldsmith,A.D.,
Lee,J.M., Quach,H.L., Toriumi,M., Yu,G., Bowser,L., Chen,H.,
Cheuk,R., Jones,T., Karlin-Neumann,G., Kim,C., Lam,B., Lin,J.,
Miranda,M., Nguyen,M., Palm,C.J., Shinn,P., Southwick,A.,
Davis,R.W., Ecker,J.R. and Theologis,A.
Yamada,K. (SSP/PGEC) and Seki,M. (RIKEN GSC) contributed equally to
this work. Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP/PGEC)
contributed equally to this work as PIs.
Annotation is based on the January 2002 version of the Arabidopsis
genome submitted to Genbank.
Method: conceptual translation supplied by author.
FEATURES Location/Qualifiers
source 1..162
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="2"
/clone="RAFL02-02-C04 (R09019)"
/ecotype="Columbia"
/note="This clone is in pBluescript vector as a XhoI/SstI
insert."
Protein 1..162
/product="putative RING zinc finger protein"
Region 100..148
/region_name="RING-H2_RHA1-like"
/note="RING finger, H2 subclass, found in Arabidopsis
thaliana RING-H2 finger A1a (RHA1A), A1b (RHA1B) and
similar proteins; cd23121"
/db_xref="CDD:438483"
Site 129..134
/site_type="active"
/note="putative active site [active]"
/db_xref="CDD:438483"
CDS 1..162
/gene="At2g04240"
/coded_by="AF326867.1:175..663"
/experiment="experimental evidence, no additional details
recorded"
ORIGIN
1 mglsslpgps egmlcvilvn talsisivkg ivrsflgivg islspssssp ssvtvssens
61 stsesfdfrv cqpesyleef rnrtptlrfe slcrckkqad necsvclskf qgdseinklk
121 cghlfhktcl ekwidywnit cplcrtplvv vpedhqlssn vw
//