U.S. flag

An official website of the United States government

putative RING zinc finger protein [Arabidopsis thaliana]

GenBank: AAG41449.1

Identical Proteins FASTA Graphics 

LOCUS       AF326867_1               162 aa            linear   PLN 18-SEP-2002
DEFINITION  putative RING zinc finger protein [Arabidopsis thaliana].
ACCESSION   AAG41449
VERSION     AAG41449.1
DBSOURCE    accession AF326867.1
KEYWORDS    .
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 162)
  AUTHORS   Yamada,K., Liu,S.X., Sakano,H., Pham,P.K., Banh,J., Chung,M.K.,
            Goldsmith,A.D., Lee,J.M., Quach,H.L., Toriumi,M., Yu,G., Bowser,L.,
            Carninci,P., Chen,H., Cheuk,R., Hayashizaki,Y., Ishida,J.,
            Jones,T., Kamiya,A., Karlin-Neumann,G., Kawai,J., Kim,C., Lam,B.,
            Lin,J., Miranda,M., Narusaka,M., Nguyen,M., Palm,C.J., Sakurai,T.,
            Satou,M., Seki,M., Shinn,P., Southwick,A., Shinozaki,K.,
            Davis,R.W., Ecker,J.R. and Theologis,A.
  TITLE     Arabidopsis Full Length cDNA Clones
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 162)
  AUTHORS   Yamada,K., Liu,S.X., Sakano,H., Pham,P.K., Banh,J., Chung,M.K.,
            Goldsmith,A.D., Lee,J.M., Quach,H.L., Toriumi,M., Yu,G., Bowser,L.,
            Carninci,P., Chen,H., Cheuk,R., Hayashizaki,Y., Ishida,J.,
            Jones,T., Kamiya,A., Karlin-Neumann,G., Kawai,J., Kim,C., Lam,B.,
            Lin,J., Miranda,M., Narusaka,M., Nguyen,M., Palm,C.J., Sakurai,T.,
            Satou,M., Seki,M., Shinn,P., Southwick,A., Shinozaki,K.,
            Davis,R.W., Ecker,J.R. and Theologis,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-DEC-2000) Plant Gene Expression Center, 800 Buchanan
            Street, Albany, CA 94710, USA
COMMENT     RIKEN Genomic Sciences Center (GSC) members carried out the
            collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
            Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J.,
            Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J.,
            Hayashizaki,Y. and Shinozaki,K.
            
            The Salk, Stanford, PGEC (SSP) Consortium members carried out the
            sequencing and annotation of the RAFL cDNAs: Yamada,K., Liu,S.X.,
            Sakano,H., Pham,P.K., Banh,J., Chung,M.K., Goldsmith,A.D.,
            Lee,J.M., Quach,H.L., Toriumi,M., Yu,G., Bowser,L., Chen,H.,
            Cheuk,R., Jones,T., Karlin-Neumann,G., Kim,C., Lam,B., Lin,J.,
            Miranda,M., Nguyen,M., Palm,C.J., Shinn,P., Southwick,A.,
            Davis,R.W., Ecker,J.R. and Theologis,A.
            
            Yamada,K. (SSP/PGEC) and Seki,M. (RIKEN GSC) contributed equally to
            this work.  Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP/PGEC)
            contributed equally to this work as PIs.
            
            Annotation is based on the January 2002 version of the Arabidopsis
            genome submitted to Genbank.
            Method: conceptual translation supplied by author.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /clone="RAFL02-02-C04 (R09019)"
                     /ecotype="Columbia"
                     /note="This clone is in pBluescript vector as a XhoI/SstI
                     insert."
     Protein         1..162
                     /product="putative RING zinc finger protein"
     Region          100..148
                     /region_name="RING-H2_RHA1-like"
                     /note="RING finger, H2 subclass, found in Arabidopsis
                     thaliana RING-H2 finger A1a (RHA1A), A1b (RHA1B) and
                     similar proteins; cd23121"
                     /db_xref="CDD:438483"
     Site            129..134
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438483"
     CDS             1..162
                     /gene="At2g04240"
                     /coded_by="AF326867.1:175..663"
                     /experiment="experimental evidence, no additional details
                     recorded"
ORIGIN      
        1 mglsslpgps egmlcvilvn talsisivkg ivrsflgivg islspssssp ssvtvssens
       61 stsesfdfrv cqpesyleef rnrtptlrfe slcrckkqad necsvclskf qgdseinklk
      121 cghlfhktcl ekwidywnit cplcrtplvv vpedhqlssn vw
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Reference sequence information

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.