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F28C11.5 [Arabidopsis thaliana]

GenBank: AAF79581.1

Identical Proteins FASTA Graphics 

LOCUS       AC007945_1               156 aa            linear   PLN 26-JUL-2016
DEFINITION  F28C11.5 [Arabidopsis thaliana].
ACCESSION   AAF79581
VERSION     AAF79581.1
DBSOURCE    accession AC007945.3
KEYWORDS    .
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Shinn,P., Brooks,S., Buehler,E., Chao,Q., Johnson-Hopson,C.,
            Khan,S., Kim,C., Altafi,H., Bei,Q., Chin,C., Chiou,J., Choi,E.,
            Conn,L., Conway,A., Gonzales,A., Hansen,N., Howing,B., Koo,T.,
            Lam,B., Lee,J., Lenz,C., Li,J., Liu,A., Liu,K., Liu,S.,
            Mukharsky,N., Nguyen,M., Palm,C., Pham,P., Sakano,H., Schwartz,J.,
            Southwick,A., Thaveri,A., Toriumi,M., Vaysberg,M., Yu,G.,
            Federspiel,N.A., Theologis,A. and Ecker,J.R.
  TITLE     Genomic sequence for Arabidopsis thaliana BAC F28C11 from
            chromosome I
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 156)
  AUTHORS   Ecker,J.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUL-1999) Arabidopsis thaliana Genome Center,
            Department of Biology, University of Pennsylvania, 38th Street and
            Hamilton Walk, Philadelphia, Pennsylvania 19104-6018, USA
REFERENCE   3  (residues 1 to 156)
  AUTHORS   Ecker,J.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUL-1999) Arabidopsis thaliana Genome Center,
            Department of Biology, University of Pennsylvania, 38th Street and
            Hamilton Walk, Philadelphia, Pennsylvania 19104-6018, USA
REFERENCE   4  (residues 1 to 156)
  AUTHORS   Chao,Q., Brooks,S., Buehler,E., Johnson-Hopson,C., Khan,S., Kim,C.,
            Shinn,P., Altafi,H., Bei,B., Chin,C., Chiou,J., Choi,E., Conn,L.,
            Conway,A., Gonzalez,A., Hansen,N., Howing,B., Koo,T., Lam,B.,
            Lee,J., Lenz,C., Li,J., Liu,A., Liu,J., Liu,S., Mukharsky,N.,
            Nguyen,M., Palm,C., Pham,P., Sakano,H., Schwartz,J., Southwick,A.,
            Thaveri,A., Toriumi,M., Vaysberg,M., Yu,G., Davis,R.,
            Federspiel,N., Theologis,A. and Ecker,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2000) Arabidopsis thaliana Genome Center,
            Department of Biology, University of Pennsylvania, 38th and
            Hamilton Walk, Philadelphia, PA 19104-6018, USA
REFERENCE   5  (residues 1 to 156)
  AUTHORS   Ecker,J.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-MAY-2000) Arabidopsis thaliana Genome Center,
            Department of Biology, University of Pennsylvania, 38th Street and
            Hamilton Walk, Philadelphia, Pennsylvania 19104-6018, USA
REFERENCE   6  (residues 1 to 156)
  AUTHORS   Cheuk,R., Shinn,P., Brooks,S., Buehler,E., Chao,Q.,
            Johnson-Hopson,C., Khan,S., Kim,C., Altafi,H., Bei,B., Chin,C.,
            Chiou,J., Choi,E., Conn,L., Conway,A., Gonzalez,A., Hansen,N.,
            Howing,B., Koo,T., Lam,B., Lee,J., Lenz,C., Li,J., Liu,A., Liu,J.,
            Liu,S., Mukharsky,N., Nguyen,M., Palm,C., Pham,P., Sakano,H.,
            Schwartz,J., Southwick,A., Thaveri,A., Toriumi,M., Vaysberg,M.,
            Yu,G., Davis,R., Federspiel,N., Theologis,A. and Ecker,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JUN-2000) Arabidopsis thaliana Genome Center,
            Department of Biology, University of Pennsylvania, 38th and
            Hamilton Walk, Philadelphia, PA 19104-6018, USA
COMMENT     Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /clone="F28C11"
     Protein         1..156
                     /product="F28C11.5"
     Region          1..76
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(6..9,11,34..37,40,42,44,46..49,68..76)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(8..12,31..35,40,42,44,46..49,68,70..76)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     Region          103..147
                     /region_name="Ribosomal_S27"
                     /note="Ribosomal protein S27a; pfam01599"
                     /db_xref="CDD:460261"
     CDS             1..156
                     /coded_by="AC007945.3:18831..19301"
                     /inference="non-experimental evidence, no additional
                     details recorded"
                     /note="putative pro-ubiquitin gb|AAA36788.1; similar to
                     ESTs gb|AW004135.1, emb|Z25557.1, emb|Z25556.1"
ORIGIN      
        1 mqifvktltg ktitlevess dtidnvkaki qdkegippdq qrlifagkql edgrtladyn
       61 iqkestlhlv lrlrggakkr kkktytkpkk ikhthkkvkl avlqfykvdg sgkvqrlkke
      121 cpsvscgpgt fmashfdrhy cgkcgttyvf kkadee
//
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Reference sequence information

  • RefSeq protein
    See the reference protein sequence for Ribosomal protein S27a / Ubiquitin family protein (NP_173755.1).

More about the AT1G23410 gene

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