LOCUS AC007945_1 156 aa linear PLN 26-JUL-2016
DEFINITION F28C11.5 [Arabidopsis thaliana].
ACCESSION AAF79581
VERSION AAF79581.1
DBSOURCE accession AC007945.3
KEYWORDS .
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 156)
AUTHORS Shinn,P., Brooks,S., Buehler,E., Chao,Q., Johnson-Hopson,C.,
Khan,S., Kim,C., Altafi,H., Bei,Q., Chin,C., Chiou,J., Choi,E.,
Conn,L., Conway,A., Gonzales,A., Hansen,N., Howing,B., Koo,T.,
Lam,B., Lee,J., Lenz,C., Li,J., Liu,A., Liu,K., Liu,S.,
Mukharsky,N., Nguyen,M., Palm,C., Pham,P., Sakano,H., Schwartz,J.,
Southwick,A., Thaveri,A., Toriumi,M., Vaysberg,M., Yu,G.,
Federspiel,N.A., Theologis,A. and Ecker,J.R.
TITLE Genomic sequence for Arabidopsis thaliana BAC F28C11 from
chromosome I
JOURNAL Unpublished
REFERENCE 2 (residues 1 to 156)
AUTHORS Ecker,J.R.
TITLE Direct Submission
JOURNAL Submitted (02-JUL-1999) Arabidopsis thaliana Genome Center,
Department of Biology, University of Pennsylvania, 38th Street and
Hamilton Walk, Philadelphia, Pennsylvania 19104-6018, USA
REFERENCE 3 (residues 1 to 156)
AUTHORS Ecker,J.R.
TITLE Direct Submission
JOURNAL Submitted (08-JUL-1999) Arabidopsis thaliana Genome Center,
Department of Biology, University of Pennsylvania, 38th Street and
Hamilton Walk, Philadelphia, Pennsylvania 19104-6018, USA
REFERENCE 4 (residues 1 to 156)
AUTHORS Chao,Q., Brooks,S., Buehler,E., Johnson-Hopson,C., Khan,S., Kim,C.,
Shinn,P., Altafi,H., Bei,B., Chin,C., Chiou,J., Choi,E., Conn,L.,
Conway,A., Gonzalez,A., Hansen,N., Howing,B., Koo,T., Lam,B.,
Lee,J., Lenz,C., Li,J., Liu,A., Liu,J., Liu,S., Mukharsky,N.,
Nguyen,M., Palm,C., Pham,P., Sakano,H., Schwartz,J., Southwick,A.,
Thaveri,A., Toriumi,M., Vaysberg,M., Yu,G., Davis,R.,
Federspiel,N., Theologis,A. and Ecker,J.
TITLE Direct Submission
JOURNAL Submitted (22-JAN-2000) Arabidopsis thaliana Genome Center,
Department of Biology, University of Pennsylvania, 38th and
Hamilton Walk, Philadelphia, PA 19104-6018, USA
REFERENCE 5 (residues 1 to 156)
AUTHORS Ecker,J.R.
TITLE Direct Submission
JOURNAL Submitted (26-MAY-2000) Arabidopsis thaliana Genome Center,
Department of Biology, University of Pennsylvania, 38th Street and
Hamilton Walk, Philadelphia, Pennsylvania 19104-6018, USA
REFERENCE 6 (residues 1 to 156)
AUTHORS Cheuk,R., Shinn,P., Brooks,S., Buehler,E., Chao,Q.,
Johnson-Hopson,C., Khan,S., Kim,C., Altafi,H., Bei,B., Chin,C.,
Chiou,J., Choi,E., Conn,L., Conway,A., Gonzalez,A., Hansen,N.,
Howing,B., Koo,T., Lam,B., Lee,J., Lenz,C., Li,J., Liu,A., Liu,J.,
Liu,S., Mukharsky,N., Nguyen,M., Palm,C., Pham,P., Sakano,H.,
Schwartz,J., Southwick,A., Thaveri,A., Toriumi,M., Vaysberg,M.,
Yu,G., Davis,R., Federspiel,N., Theologis,A. and Ecker,J.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2000) Arabidopsis thaliana Genome Center,
Department of Biology, University of Pennsylvania, 38th and
Hamilton Walk, Philadelphia, PA 19104-6018, USA
COMMENT Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..156
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="1"
/clone="F28C11"
Protein 1..156
/product="F28C11.5"
Region 1..76
/region_name="Ubl_ubiquitin"
/note="ubiquitin-like (Ubl) domain found in ubiquitin;
cd01803"
/db_xref="CDD:340501"
Site order(6..9,11,34..37,40,42,44,46..49,68..76)
/site_type="other"
/note="oligomer interface [polypeptide binding]"
/db_xref="CDD:340501"
Site order(8..12,31..35,40,42,44,46..49,68,70..76)
/site_type="other"
/note="E1 interaction site [polypeptide binding]"
/db_xref="CDD:340501"
Region 103..147
/region_name="Ribosomal_S27"
/note="Ribosomal protein S27a; pfam01599"
/db_xref="CDD:460261"
CDS 1..156
/coded_by="AC007945.3:18831..19301"
/inference="non-experimental evidence, no additional
details recorded"
/note="putative pro-ubiquitin gb|AAA36788.1; similar to
ESTs gb|AW004135.1, emb|Z25557.1, emb|Z25556.1"
ORIGIN
1 mqifvktltg ktitlevess dtidnvkaki qdkegippdq qrlifagkql edgrtladyn
61 iqkestlhlv lrlrggakkr kkktytkpkk ikhthkkvkl avlqfykvdg sgkvqrlkke
121 cpsvscgpgt fmashfdrhy cgkcgttyvf kkadee
//