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contains similarity to reverse transcriptases [Arabidopsis thaliana]

GenBank: AAC28197.1

Identical Proteins FASTA Graphics 

LOCUS       AAC28197                1077 aa            linear   PLN 03-AUG-1998
DEFINITION  contains similarity to reverse transcriptases [Arabidopsis
            thaliana].
ACCESSION   AAC28197
VERSION     AAC28197.1
DBSOURCE    locus T24H24 accession AF075598.1
KEYWORDS    .
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 1077)
  AUTHORS   Washington University Genome Sequencing Center.
  TITLE     The A. thaliana Genome Sequencing Project
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 1077)
  AUTHORS   Courtney,L., Stoneking,T., Langston,Y. and Mead,K.
  TITLE     The sequence of A. thaliana T24H24
  JOURNAL   Unpublished
REFERENCE   3  (residues 1 to 1077)
  AUTHORS   Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-AUG-1998) Department of Genetics, Washington
            University, 4444 Forest Park Avenue, St. Louis, Missouri 63108, USA
COMMENT     Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="IV"
                     /map="unknown"
                     /clone="T24H24"
                     /ecotype="Columbia"
     Protein         1..1077
                     /name="contains similarity to reverse transcriptases"
     Region          467..689
                     /region_name="RT_nLTR_like"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; cd01650"
                     /db_xref="CDD:238827"
     Site            order(552..557,616,618..619,686..687)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     Site            order(552..557,618)
                     /site_type="other"
                     /note="putative NTP binding site [chemical binding]"
                     /db_xref="CDD:238827"
     Region          <977..1070
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..1077
                     /gene="T24H24.17"
                     /coded_by="complement(join(AF075598.1:77635..77936,
                     AF075598.1:78293..78727,AF075598.1:78938..79686,
                     AF075598.1:79810..81042,AF075598.1:81703..82217))"
                     /inference="non-experimental evidence, no additional
                     details recorded"
ORIGIN      
        1 mlktigeelg eildmeitss aaklrvlvdg lqpltketiv dfrdgsettv flvyknlknh
       61 chhcfrlshe tklcpgltes rgkdsvsvqp avsqdsrggs rnyytpkdnf taprlshhdc
      121 erthysqevs nrqrnshpss pvlsnhfsad rgrtqrerrg plvevtlwqf lrldramans
      181 dwiiaypsgr seylrfegsd hrplvtsfdh vqkktknifr ydrtlkdnpe isklmnetwk
      241 snpsakvdyr lhlcraalln wskehhlnsq keilslrvql eealtddaat qdsvdllnqn
      301 lllayrkeet fwkqrsrnlw lalgdknscf fhaatnsrra intisviens agtsvyedse
      361 iietisdyfq diftsqegdr tsvvaealsp cittdmnntl islptvaeik qaclsihpdk
      421 apgrdgfsas ffqsnwstvs eeitaevqaf fiseilpqki nhthvrlipk ipapqkvsdy
      481 rpialcsvyy kiiakllakr lqpilhscis enqsafvpqr aisdnvlith ealhylknsg
      541 alvncymavk tdmskaydrl ewdfvkaale emgfhhhfvg wiievlsrmc lkaqengslp
      601 girvamgcpr vnhllfaddt mffcrvdpks clklksilhk yelasgqkin qakysitfsa
      661 ktppavrerv kqilliqkeg gqgkylglpe lfgrkkkdlf taivdrikqr alswssrfls
      721 sagkltmlks vlstmptytm scfqlplslc kriqstltrf wwdskpdqrk mswiswqkmt
      781 lsfksgglgf rdvqtfnkal laklswrllq npscllakll lgkyckhstl ldwttnwnke
      841 lirqllpvye kdilllkpsl lgaadrwawl ptssglyaan sgyfealket aslenppnhd
      901 lvknfnwrsn iwglqtspkt klylwvptfs lgisltrqsa hdvskqnrls icsftaplha
      961 gsgiwlpsqs dpismesgns sasdvgspli aetlvtladv rvacesdika isfasdsqii
     1021 vkalnqklqv kelhgilhdi lslsssfdac tftfinrefn hqadalakra lvccmep
//
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