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GenBank: AAC28197.1
Identical Proteins FASTA Graphics
LOCUS AAC28197 1077 aa linear PLN 03-AUG-1998 DEFINITION contains similarity to reverse transcriptases [Arabidopsis thaliana]. ACCESSION AAC28197 VERSION AAC28197.1 DBSOURCE locus T24H24 accession AF075598.1 KEYWORDS . SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (residues 1 to 1077) AUTHORS Washington University Genome Sequencing Center. TITLE The A. thaliana Genome Sequencing Project JOURNAL Unpublished REFERENCE 2 (residues 1 to 1077) AUTHORS Courtney,L., Stoneking,T., Langston,Y. and Mead,K. TITLE The sequence of A. thaliana T24H24 JOURNAL Unpublished REFERENCE 3 (residues 1 to 1077) AUTHORS Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-AUG-1998) Department of Genetics, Washington University, 4444 Forest Park Avenue, St. Louis, Missouri 63108, USA COMMENT Method: conceptual translation. FEATURES Location/Qualifiers source 1..1077 /organism="Arabidopsis thaliana" /db_xref="taxon:3702" /chromosome="IV" /map="unknown" /clone="T24H24" /ecotype="Columbia" Protein 1..1077 /name="contains similarity to reverse transcriptases" Region 467..689 /region_name="RT_nLTR_like" /note="RT_nLTR: Non-LTR (long terminal repeat) retrotransposon and non-LTR retrovirus reverse transcriptase (RT). This subfamily contains both non-LTR retrotransposons and non-LTR retrovirus RTs. RTs catalyze the conversion of single-stranded RNA into...; cd01650" /db_xref="CDD:238827" Site order(552..557,616,618..619,686..687) /site_type="active" /note="putative active site [active]" /db_xref="CDD:238827" Site order(552..557,618) /site_type="other" /note="putative NTP binding site [chemical binding]" /db_xref="CDD:238827" Region <977..1070 /region_name="RNase_H_like" /note="Ribonuclease H-like superfamily, including RNase H, HI, HII, HIII, and RNase-like domain IV of spliceosomal protein Prp8; cl14782" /db_xref="CDD:449355" CDS 1..1077 /gene="T24H24.17" /coded_by="complement(join(AF075598.1:77635..77936, AF075598.1:78293..78727,AF075598.1:78938..79686, AF075598.1:79810..81042,AF075598.1:81703..82217))" /inference="non-experimental evidence, no additional details recorded" ORIGIN 1 mlktigeelg eildmeitss aaklrvlvdg lqpltketiv dfrdgsettv flvyknlknh 61 chhcfrlshe tklcpgltes rgkdsvsvqp avsqdsrggs rnyytpkdnf taprlshhdc 121 erthysqevs nrqrnshpss pvlsnhfsad rgrtqrerrg plvevtlwqf lrldramans 181 dwiiaypsgr seylrfegsd hrplvtsfdh vqkktknifr ydrtlkdnpe isklmnetwk 241 snpsakvdyr lhlcraalln wskehhlnsq keilslrvql eealtddaat qdsvdllnqn 301 lllayrkeet fwkqrsrnlw lalgdknscf fhaatnsrra intisviens agtsvyedse 361 iietisdyfq diftsqegdr tsvvaealsp cittdmnntl islptvaeik qaclsihpdk 421 apgrdgfsas ffqsnwstvs eeitaevqaf fiseilpqki nhthvrlipk ipapqkvsdy 481 rpialcsvyy kiiakllakr lqpilhscis enqsafvpqr aisdnvlith ealhylknsg 541 alvncymavk tdmskaydrl ewdfvkaale emgfhhhfvg wiievlsrmc lkaqengslp 601 girvamgcpr vnhllfaddt mffcrvdpks clklksilhk yelasgqkin qakysitfsa 661 ktppavrerv kqilliqkeg gqgkylglpe lfgrkkkdlf taivdrikqr alswssrfls 721 sagkltmlks vlstmptytm scfqlplslc kriqstltrf wwdskpdqrk mswiswqkmt 781 lsfksgglgf rdvqtfnkal laklswrllq npscllakll lgkyckhstl ldwttnwnke 841 lirqllpvye kdilllkpsl lgaadrwawl ptssglyaan sgyfealket aslenppnhd 901 lvknfnwrsn iwglqtspkt klylwvptfs lgisltrqsa hdvskqnrls icsftaplha 961 gsgiwlpsqs dpismesgns sasdvgspli aetlvtladv rvacesdika isfasdsqii 1021 vkalnqklqv kelhgilhdi lslsssfdac tftfinrefn hqadalakra lvccmep //
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