LOCUS NP_171817 265 aa linear PLN 20-OCT-2022
DEFINITION non-structural protein [Arabidopsis thaliana].
ACCESSION NP_171817
VERSION NP_171817.2
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
DBSOURCE REFSEQ: accession NM_100200.3
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 265)
AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
Fraser,C.M., Venter,J.C. and Davis,R.W.
TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 816-820 (2000)
PUBMED 11130712
REFERENCE 2 (residues 1 to 265)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 265)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (residues 1 to 265)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 5 (residues 1 to 265)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
The reference sequence is identical to AEE27540.
On Nov 3, 2005 this sequence version replaced NP_171817.1.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..265
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="1"
/ecotype="Columbia"
Protein 1..265
/product="non-structural protein"
/calculated_mol_wt=29882
CDS 1..265
/locus_tag="AT1G03180"
/gene_synonym="F15K9.21; F15K9_21"
/coded_by="NM_100200.3:186..983"
/inference="Similar to RNA sequence,
EST:INSD:EG471432.1,INSD:EG471430.1,INSD:DR367862.1,
INSD:EG419336.1,INSD:EG471426.1,INSD:EG471421.1,
INSD:EG471429.1,INSD:EG471433.1,INSD:EG471435.1,
INSD:DR367861.1,INSD:EG471434.1,INSD:EG471427.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY924649.1,INSD:AY800558.1"
/note="unknown protein; Has 36 Blast hits to 36 proteins
in 15 species: Archae - 0; Bacteria - 0; Metazoa - 3;
Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink)."
/db_xref="Araport:AT1G03180"
/db_xref="GeneID:839560"
/db_xref="TAIR:AT1G03180"
ORIGIN
1 memaegegtt eenydvdiat tasslggsgv fhiindivgf vlymhqqips vlqdmslefe
61 glqtefmdle tnlaepqvkp lvrrklmsrk revkneikkl eklmktissl rsalqlmire
121 apgiqkvvli lggsplrpqn ayellftqrr dhvlgyegdf akskaaeals kktiralist
181 gagstsypgp mrlfilvhap ptlnlpqhfl pkrdfrynrk fvpsklrfkc rtqdnatnsp
241 ptndliwyqc rhvikglafh qpvee
//