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non-structural protein [Arabidopsis thaliana]

NCBI Reference Sequence: NP_171817.2

Identical Proteins FASTA Graphics 

LOCUS       NP_171817                265 aa            linear   PLN 20-OCT-2022
DEFINITION  non-structural protein [Arabidopsis thaliana].
ACCESSION   NP_171817
VERSION     NP_171817.2
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_100200.3
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
            White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
            Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
            Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
            Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
            Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
            Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
            Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
            Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
            Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
            Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
            Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
            Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
            Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
            Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
            Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
            Fraser,C.M., Venter,J.C. and Davis,R.W.
  TITLE     Sequence and analysis of chromosome 1 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 816-820 (2000)
   PUBMED   11130712
REFERENCE   2  (residues 1 to 265)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 265)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 265)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   5  (residues 1 to 265)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to AEE27540.
            
            On Nov 3, 2005 this sequence version replaced NP_171817.1.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     Protein         1..265
                     /product="non-structural protein"
                     /calculated_mol_wt=29882
     CDS             1..265
                     /locus_tag="AT1G03180"
                     /gene_synonym="F15K9.21; F15K9_21"
                     /coded_by="NM_100200.3:186..983"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EG471432.1,INSD:EG471430.1,INSD:DR367862.1,
                     INSD:EG419336.1,INSD:EG471426.1,INSD:EG471421.1,
                     INSD:EG471429.1,INSD:EG471433.1,INSD:EG471435.1,
                     INSD:DR367861.1,INSD:EG471434.1,INSD:EG471427.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:AY924649.1,INSD:AY800558.1"
                     /note="unknown protein; Has 36 Blast hits to 36 proteins
                     in 15 species: Archae - 0; Bacteria - 0; Metazoa - 3;
                     Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0
                     (source: NCBI BLink)."
                     /db_xref="Araport:AT1G03180"
                     /db_xref="GeneID:839560"
                     /db_xref="TAIR:AT1G03180"
ORIGIN      
        1 memaegegtt eenydvdiat tasslggsgv fhiindivgf vlymhqqips vlqdmslefe
       61 glqtefmdle tnlaepqvkp lvrrklmsrk revkneikkl eklmktissl rsalqlmire
      121 apgiqkvvli lggsplrpqn ayellftqrr dhvlgyegdf akskaaeals kktiralist
      181 gagstsypgp mrlfilvhap ptlnlpqhfl pkrdfrynrk fvpsklrfkc rtqdnatnsp
      241 ptndliwyqc rhvikglafh qpvee
//
Feature
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Protein clusters for NP_171817.2

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