LOCUS NP_001246166 2020 aa linear INV 26-DEC-2023
DEFINITION down syndrome cell adhesion molecule 1, isoform CB [Drosophila
melanogaster].
ACCESSION NP_001246166
VERSION NP_001246166.1
DBLINK BioProject: PRJNA164
BioSample: SAMN02803731
DBSOURCE REFSEQ: accession NM_001259237.1
KEYWORDS RefSeq.
SOURCE Drosophila melanogaster (fruit fly)
ORGANISM Drosophila melanogaster
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
REFERENCE 1 (residues 1 to 2020)
AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St
Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K.,
Strelets,V., Russo,S.M. and Gelbart,W.M.
CONSRTM FlyBase Consortium
TITLE Gene Model Annotations for Drosophila melanogaster: Impact of
High-Throughput Data
JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015)
PUBMED 26109357
REMARK Publication Status: Online-Only
REFERENCE 2 (residues 1 to 2020)
AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St
Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B.,
Russo,S.M. and Gelbart,W.M.
CONSRTM FlyBase Consortium
TITLE Gene Model Annotations for Drosophila melanogaster: The
Rule-Benders
JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015)
PUBMED 26109356
REMARK Publication Status: Online-Only
REFERENCE 3 (residues 1 to 2020)
AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I.,
Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R.,
Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G.,
Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N.,
Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A.,
Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E.
TITLE The Release 6 reference sequence of the Drosophila melanogaster
genome
JOURNAL Genome Res 25 (3), 445-458 (2015)
PUBMED 25589440
REFERENCE 4 (residues 1 to 2020)
AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M.,
Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F.,
Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E.
TITLE Sequence finishing and mapping of Drosophila melanogaster
heterochromatin
JOURNAL Science 316 (5831), 1625-1628 (2007)
PUBMED 17569867
REFERENCE 5 (residues 1 to 2020)
AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H.
TITLE The Release 5.1 annotation of Drosophila melanogaster
heterochromatin
JOURNAL Science 316 (5831), 1586-1591 (2007)
PUBMED 17569856
REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325]
REFERENCE 6 (residues 1 to 2020)
AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D.,
Ashburner,M. and Anxolabehere,D.
TITLE Combined evidence annotation of transposable elements in genome
sequences
JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005)
PUBMED 16110336
REFERENCE 7 (residues 1 to 2020)
AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A.,
Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A.,
Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W.,
Celniker,S.E., Rubin,G.M. and Karpen,G.H.
TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun
assembly
JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002)
PUBMED 12537574
REFERENCE 8 (residues 1 to 2020)
AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J.,
Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E.,
Rubin,G.M., Ashburner,M. and Celniker,S.E.
TITLE The transposable elements of the Drosophila melanogaster
euchromatin: a genomics perspective
JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002)
PUBMED 12537573
REFERENCE 9 (residues 1 to 2020)
AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S.,
Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E.,
Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L.,
Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D.,
Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J.,
Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M.,
Rubin,G.M. and Lewis,S.E.
TITLE Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review
JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002)
PUBMED 12537572
REFERENCE 10 (residues 1 to 2020)
AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W.,
Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E.,
Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M.,
Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S.,
Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M.,
Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W.,
Gibbs,R.A. and Rubin,G.M.
TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila
melanogaster euchromatic genome sequence
JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002)
PUBMED 12537568
REFERENCE 11 (residues 1 to 2020)
AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D.,
Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F.,
George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N.,
Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X.,
Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D.,
Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L.,
Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D.,
Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M.,
Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S.,
Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P.,
Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A.,
Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B.,
Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I.,
Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S.,
Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C.,
Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S.,
Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z.,
Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J.,
Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J.,
Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z.,
Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C.,
Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A.,
Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C.,
McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C.,
Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L.,
Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K.,
Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S.,
Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K.,
Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I.,
Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C.,
Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R.,
Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A.,
Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT,
Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F.,
Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H.,
Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O.,
Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C.
TITLE The genome sequence of Drosophila melanogaster
JOURNAL Science 287 (5461), 2185-2195 (2000)
PUBMED 10731132
REFERENCE 12 (residues 1 to 2020)
AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R.,
Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R.,
Smith,E., Yu,C. and Rubin,G.
CONSRTM Berkeley Drosophila Genome Project
TITLE Drosophila melanogaster release 4 sequence
JOURNAL Unpublished
REFERENCE 13 (residues 1 to 2020)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 14 (residues 1 to 2020)
CONSRTM FlyBase
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological
Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE 15 (residues 1 to 2020)
CONSRTM FlyBase
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological
Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE 16 (residues 1 to 2020)
CONSRTM FlyBase
TITLE Direct Submission
JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological
Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE 17 (residues 1 to 2020)
CONSRTM FlyBase
TITLE Direct Submission
JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological
Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE 18 (residues 1 to 2020)
CONSRTM FlyBase
TITLE Direct Submission
JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological
Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE 19 (residues 1 to 2020)
CONSRTM FlyBase
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological
Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE 20 (residues 1 to 2020)
CONSRTM FlyBase
TITLE Direct Submission
JOURNAL Submitted (07-OCT-2015) FlyBase, Harvard University, Biological
Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA
REFERENCE 21 (residues 1 to 2020)
AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R.,
Park,S., Svirskas,R. and Karpen,G.
TITLE Direct Submission
JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project,
Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne
Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA
REMARK Direct Submission
REFERENCE 22 (residues 1 to 2020)
AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S.,
Svirskas,R. and Rubin,G.
TITLE Direct Submission
JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project,
Lawrence Berkeley National Laboratory, One Cyclotron Road, MS
64-121, Berkeley, CA 94720, USA
REMARK Direct Submission
REFERENCE 23 (residues 1 to 2020)
AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H.
CONSRTM Drosophila Heterochromatin Genome Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project,
Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron
Road, Mailstop 64-121, Berkeley, CA 94720, USA
REFERENCE 24 (residues 1 to 2020)
AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J.
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive,
Rockville, MD 20850, USA
COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. The
reference sequence is identical to AFH07921.
##Genome-Annotation-Data-START##
Annotation Provider :: FlyBase
Annotation Status :: Full annotation
Annotation Version :: Release 6.54
URL :: http://flybase.org
##Genome-Annotation-Data-END##
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..2020
/organism="Drosophila melanogaster"
/db_xref="taxon:7227"
/chromosome="2R"
/genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2]
bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]"
Protein 1..2020
/product="down syndrome cell adhesion molecule 1, isoform
CB"
/name="CG17800 gene product from transcript CG17800-RCB"
/note="CG17800-PCB; Dscam1-PCB; down syndrome cell
adhesion molecule; dscam; down syndrome cell-adhesion
molecule; drosophila down syndrome cell adhesion molecule
1; Down's syndrome cell adhesion molecule; lethal(2)43Bc"
/calculated_mol_wt=222918
Region 38..136
/region_name="IgI_1_Dscam"
/note="First immunoglobulin domain of the Drosophila
melanogaster Dscam protein, and similar domains; a member
of the I-set of IgSF domains; cd20955"
/db_xref="CDD:409547"
Region 39..42
/region_name="Ig strand A"
/note="Ig strand A [structural motif]"
/db_xref="CDD:409547"
Region 48..52
/region_name="Ig strand A'"
/note="Ig strand A' [structural motif]"
/db_xref="CDD:409547"
Region 55..64
/region_name="Ig strand B"
/note="Ig strand B [structural motif]"
/db_xref="CDD:409547"
Region 70..76
/region_name="Ig strand C"
/note="Ig strand C [structural motif]"
/db_xref="CDD:409547"
Region 78..81
/region_name="Ig strand C'"
/note="Ig strand C' [structural motif]"
/db_xref="CDD:409547"
Region 87..90
/region_name="Ig strand D"
/note="Ig strand D [structural motif]"
/db_xref="CDD:409547"
Region 95..100
/region_name="Ig strand E"
/note="Ig strand E [structural motif]"
/db_xref="CDD:409547"
Region 113..121
/region_name="Ig strand F"
/note="Ig strand F [structural motif]"
/db_xref="CDD:409547"
Region 124..136
/region_name="Ig strand G"
/note="Ig strand G [structural motif]"
/db_xref="CDD:409547"
Region 246..340
/region_name="IgI_2_Dscam"
/note="Second immunoglobulin domain of the Drosophila
melanogaster Dscam protein, and similar domains; a member
of the I-set of IgSF domains; cd20953"
/db_xref="CDD:409545"
Region 247..250
/region_name="Ig strand A"
/note="Ig strand A [structural motif]"
/db_xref="CDD:409545"
Region 257..261
/region_name="Ig strand A'"
/note="Ig strand A' [structural motif]"
/db_xref="CDD:409545"
Region 264..271
/region_name="Ig strand B"
/note="Ig strand B [structural motif]"
/db_xref="CDD:409545"
Region 279..285
/region_name="Ig strand C"
/note="Ig strand C [structural motif]"
/db_xref="CDD:409545"
Region 291..294
/region_name="Ig strand C'"
/note="Ig strand C' [structural motif]"
/db_xref="CDD:409545"
Region 300..304
/region_name="Ig strand D"
/note="Ig strand D [structural motif]"
/db_xref="CDD:409545"
Region 306..312
/region_name="Ig strand E"
/note="Ig strand E [structural motif]"
/db_xref="CDD:409545"
Region 319..327
/region_name="Ig strand F"
/note="Ig strand F [structural motif]"
/db_xref="CDD:409545"
Region 330..340
/region_name="Ig strand G"
/note="Ig strand G [structural motif]"
/db_xref="CDD:409545"
Region 343..423
/region_name="IgC2_3_Dscam"
/note="Third immunoglobulin domain of the Drosophila
melanogaster Dscam protein, and similar domains; a member
of the Constant 2 (C2)-set of IgSF domains; cd20957"
/db_xref="CDD:409549"
Region 344..349
/region_name="Ig strand A"
/note="Ig strand A [structural motif]"
/db_xref="CDD:409549"
Region 352..356
/region_name="Ig strand A'"
/note="Ig strand A' [structural motif]"
/db_xref="CDD:409549"
Region 359..369
/region_name="Ig strand B"
/note="Ig strand B [structural motif]"
/db_xref="CDD:409549"
Region 374..380
/region_name="Ig strand C"
/note="Ig strand C [structural motif]"
/db_xref="CDD:409549"
Region 381..384
/region_name="Ig strand C'"
/note="Ig strand C' [structural motif]"
/db_xref="CDD:409549"
Region 389..395
/region_name="Ig strand E"
/note="Ig strand E [structural motif]"
/db_xref="CDD:409549"
Region 402..410
/region_name="Ig strand F"
/note="Ig strand F [structural motif]"
/db_xref="CDD:409549"
Region 413..423
/region_name="Ig strand G"
/note="Ig strand G [structural motif]"
/db_xref="CDD:409549"
Region 429..524
/region_name="IgI_4_Dscam"
/note="Fourth immunoglobulin domain of the Drosophila
melanogaster Dscam protein, and similar domains; a member
of the I-set of IgSF domains; cd20956"
/db_xref="CDD:409548"
Region 429..432
/region_name="Ig strand A"
/note="Ig strand A [structural motif]"
/db_xref="CDD:409548"
Region 438..442
/region_name="Ig strand A'"
/note="Ig strand A' [structural motif]"
/db_xref="CDD:409548"
Region 445..454
/region_name="Ig strand B"
/note="Ig strand B [structural motif]"
/db_xref="CDD:409548"
Region 459..465
/region_name="Ig strand C"
/note="Ig strand C [structural motif]"
/db_xref="CDD:409548"
Region 467..470
/region_name="Ig strand C'"
/note="Ig strand C' [structural motif]"
/db_xref="CDD:409548"
Region 475..483
/region_name="Ig strand D"
/note="Ig strand D [structural motif]"
/db_xref="CDD:409548"
Region 487..496
/region_name="Ig strand E"
/note="Ig strand E [structural motif]"
/db_xref="CDD:409548"
Region 503..511
/region_name="Ig strand F"
/note="Ig strand F [structural motif]"
/db_xref="CDD:409548"
Region 514..524
/region_name="Ig strand G"
/note="Ig strand G [structural motif]"
/db_xref="CDD:409548"
Region 528..615
/region_name="IgI_5_Dscam"
/note="Fifth immunoglobulin domain of the Drosophila
melanogaster Dscam protein, and similar domains; a member
of the I-set of IgSF domains; cd20958"
/db_xref="CDD:409550"
Region 528..530
/region_name="Ig strand A"
/note="Ig strand A [structural motif]"
/db_xref="CDD:409550"
Region 535..539
/region_name="Ig strand A'"
/note="Ig strand A' [structural motif]"
/db_xref="CDD:409550"
Region 542..549
/region_name="Ig strand B"
/note="Ig strand B [structural motif]"
/db_xref="CDD:409550"
Region 556..562
/region_name="Ig strand C"
/note="Ig strand C [structural motif]"
/db_xref="CDD:409550"
Region 563..565
/region_name="Ig strand C'"
/note="Ig strand C' [structural motif]"
/db_xref="CDD:409550"
Region 572..576
/region_name="Ig strand D"
/note="Ig strand D [structural motif]"
/db_xref="CDD:409550"
Region 579..585
/region_name="Ig strand E"
/note="Ig strand E [structural motif]"
/db_xref="CDD:409550"
Region 593..601
/region_name="Ig strand F"
/note="Ig strand F [structural motif]"
/db_xref="CDD:409550"
Region 605..615
/region_name="Ig strand G"
/note="Ig strand G [structural motif]"
/db_xref="CDD:409550"
Region 618..715
/region_name="Ig"
/note="Immunoglobulin domain; cl11960"
/db_xref="CDD:472250"
Region 636..640
/region_name="Ig strand B"
/note="Ig strand B [structural motif]"
/db_xref="CDD:409353"
Region 650..654
/region_name="Ig strand C"
/note="Ig strand C [structural motif]"
/db_xref="CDD:409353"
Region 681..685
/region_name="Ig strand E"
/note="Ig strand E [structural motif]"
/db_xref="CDD:409353"
Region 695..700
/region_name="Ig strand F"
/note="Ig strand F [structural motif]"
/db_xref="CDD:409353"
Region 708..711
/region_name="Ig strand G"
/note="Ig strand G [structural motif]"
/db_xref="CDD:409353"
Region 718..812
/region_name="IgI_7_Dscam"
/note="Seventh immunoglobulin domain of the Drosophila
melanogaster Dscam protein, and similar domains; a member
of the I-set of IgSF domains; cd20954"
/db_xref="CDD:409546"
Region 718..722
/region_name="Ig strand A"
/note="Ig strand A [structural motif]"
/db_xref="CDD:409546"
Region 727..731
/region_name="Ig strand A'"
/note="Ig strand A' [structural motif]"
/db_xref="CDD:409546"
Region 734..743
/region_name="Ig strand B"
/note="Ig strand B [structural motif]"
/db_xref="CDD:409546"
Region 749..755
/region_name="Ig strand C"
/note="Ig strand C [structural motif]"
/db_xref="CDD:409546"
Region 761..764
/region_name="Ig strand C'"
/note="Ig strand C' [structural motif]"
/db_xref="CDD:409546"
Region 772..775
/region_name="Ig strand D"
/note="Ig strand D [structural motif]"
/db_xref="CDD:409546"
Region 777..783
/region_name="Ig strand E"
/note="Ig strand E [structural motif]"
/db_xref="CDD:409546"
Region 790..798
/region_name="Ig strand F"
/note="Ig strand F [structural motif]"
/db_xref="CDD:409546"
Region 803..812
/region_name="Ig strand G"
/note="Ig strand G [structural motif]"
/db_xref="CDD:409546"
Region 827..913
/region_name="Ig"
/note="Immunoglobulin domain; cl11960"
/db_xref="CDD:472250"
Region 833..837
/region_name="Ig strand B"
/note="Ig strand B [structural motif]"
/db_xref="CDD:409353"
Region 846..850
/region_name="Ig strand C"
/note="Ig strand C [structural motif]"
/db_xref="CDD:409353"
Region 877..881
/region_name="Ig strand E"
/note="Ig strand E [structural motif]"
/db_xref="CDD:409353"
Region 891..896
/region_name="Ig strand F"
/note="Ig strand F [structural motif]"
/db_xref="CDD:409353"
Region <896..1209
/region_name="FN3"
/note="Fibronectin type 3 domain [General function
prediction only]; COG3401"
/db_xref="CDD:442628"
Region 904..907
/region_name="Ig strand G"
/note="Ig strand G [structural motif]"
/db_xref="CDD:409353"
Region 1219..1309
/region_name="FN3"
/note="Fibronectin type 3 domain; One of three types of
internal repeats found in the plasma protein fibronectin.
Its tenth fibronectin type III repeat contains an RGD cell
recognition sequence in a flexible loop between 2 strands.
Approximately 2% of all...; cd00063"
/db_xref="CDD:238020"
Site order(1219,1284,1299)
/site_type="active"
/note="Interdomain contacts [active]"
/db_xref="CDD:238020"
Site order(1300..1301,1303..1304)
/site_type="active"
/note="Cytokine receptor motif [active]"
/db_xref="CDD:238020"
Region <1336..1403
/region_name="Ig"
/note="Immunoglobulin domain; cl11960"
/db_xref="CDD:472250"
Region 1347..1351
/region_name="Ig strand C"
/note="Ig strand C [structural motif]"
/db_xref="CDD:409358"
Region 1369..1373
/region_name="Ig strand E"
/note="Ig strand E [structural motif]"
/db_xref="CDD:409358"
Region 1383..1388
/region_name="Ig strand F"
/note="Ig strand F [structural motif]"
/db_xref="CDD:409358"
Region 1396..1399
/region_name="Ig strand G"
/note="Ig strand G [structural motif]"
/db_xref="CDD:409358"
Region 1406..1496
/region_name="FN3"
/note="Fibronectin type 3 domain; One of three types of
internal repeats found in the plasma protein fibronectin.
Its tenth fibronectin type III repeat contains an RGD cell
recognition sequence in a flexible loop between 2 strands.
Approximately 2% of all...; cd00063"
/db_xref="CDD:238020"
Site order(1406,1469,1484)
/site_type="active"
/note="Interdomain contacts [active]"
/db_xref="CDD:238020"
Site order(1485..1486,1488..1489)
/site_type="active"
/note="Cytokine receptor motif [active]"
/db_xref="CDD:238020"
Region 1501..1581
/region_name="FN3"
/note="Fibronectin type 3 domain; One of three types of
internal repeats found in the plasma protein fibronectin.
Its tenth fibronectin type III repeat contains an RGD cell
recognition sequence in a flexible loop between 2 strands.
Approximately 2% of all...; cd00063"
/db_xref="CDD:238020"
Site order(1501,1566,1581)
/site_type="active"
/note="Interdomain contacts [active]"
/db_xref="CDD:238020"
Region 1875..1990
/region_name="Dscam_C"
/note="Down syndrome cell adhesion molecule C terminal;
pfam12355"
/db_xref="CDD:463546"
CDS 1..2020
/gene="Dscam1"
/locus_tag="Dmel_CG17800"
/gene_synonym="43Bc; CG17800; CT39257; DmDscam;
Dmel\CG17800; Dm_2R:13579; Dm_2R:13612; dscam; dScam;
Dscam; DsCam; DScam; DSCAM; Dscam-hv; dscam1; DSCAM1; Dsm;
l(2)05518; l(2)43Bc; Neu1; p270"
/coded_by="NM_001259237.1:520..6581"
/inference="similar to DNA sequence:INSD:AF260530.1"
/exception="annotated by transcript or proteomic data"
/note="frameshift"
/db_xref="FLYBASE:FBpp0297687"
/db_xref="GeneID:35652"
/db_xref="FLYBASE:FBgn0033159"
ORIGIN
1 mnmpnerlkw lmlfaavali acgsqtlaan ppdadqkgpv flkeptnrid fsnstgaeie
61 ckasgnpmpe iiwirsdgta vgdvpglrqi ssdgklvfpp fraedyrqev haqvyaclar
121 nqfgsiisrd vhvravvaqy ydtdvnkayv irgnaavlkc eipsfvadfv svvswhtdqn
181 edflpgseyd gkylvlpsge lhirevgped gyksyqcrtk hrltgetrls atkgrlvite
241 pvgsvapkvd trdeftfart rmgaskalic paqsypmpff rwykfiegtt rkqavvlndr
301 vkqvsgtlii kdavvedsgk ylcvvnnsvg gesvetvltv taplsakidp ptqtvdfgrp
361 avftcqytgn piktvswmkd gkaighsepv lriesvkked kgmyqcfvrn dqesaeasae
421 lklggrfdpp virqafqeet mepgpsvflk cvaggnptpe isweldgkki anndryqvgq
481 yvtvngdvvs ylnitsvhan dgglykciak skvgvaehsa klnvyglpyi rqmekkaiva
541 getlivtcpv agypidsivw erdnralpin rkqkvfpngt liienverns dqatytcvak
601 nqegysargs levqvmvlpq ivpfayedli nmgdsidlfc qiqkgdrpik vhwsfersag
661 dygfdqvqpq mrtnrisekt smisipsasp ahtgrdtcia snkagtttys vdltvnvppr
721 wileptdkaf aqgsdakvec kadgfpkpqv twkkavgdtp geykdlkksd nirveegtlh
781 vdniqktneg yylceaingi gsglsavimi svqappefte klrnqtarrg epavlqceak
841 gekpigilwn mnnmrldpkn dnrytireei lstgvmssls ikrtersdsa lftcvatnaf
901 gsddasinmi vqevpempya lkvldksgrs vqlswaqpyd gnspldryii efkrsrasws
961 eidrvivpgh tteaqvqkls pattyniriv aenaigtsqs seavtiitae eapsgkpqni
1021 kvepvnqttm rvtwkppprt ewngeilgyy vgyklsntns syvfetinfi teegkehnle
1081 lqnlrvytqy svviqafnki gagplseeek qftaegtpsq ppsdtacttl tsqtirvgwv
1141 spplesangv iktykvvyap sdewydetkr hykktassdt vlhglkkytn ytmqvlatta
1201 ggdgvrsvpi hcqtepdvpe aptdvkalvm gnaailvswr ppaqpngiit qytvyskaeg
1261 aetetktqkv phyqmsfeat eleknkpyef wvtasttige gqqsksivam psdqvpakia
1321 sfddtftatf kedakmpcla vgapqpeitw kikgvefsan drmrvlpdgs lliksvnrqd
1381 agdyschaen siakdsithk livlappqsp hvtlsatttd altvklkphe gdtaplhgyt
1441 lhykpefgew etsevsvdsq khniegllcg sryqvyatgf nnigageasd ilntrtkgqk
1501 pklpekprfi evssnsvslh fkawkdggcp mshfvveskk rdqiewnqis nnvkpdnnyv
1561 vldlepatwy nlritahnsa gftvaeydfa tltvtggtia psrdlpelsa edtiriilsn
1621 lnlvvpvvaa llviiiaiiv icilrskgnh hkddvvynqt mgpgatldkr rpdlrdelgy
1681 iappnrklpp vpgsnyntcd rikrgrgglr snhstwdprr npnlyeelka ppvpmhgnhy
1741 ghahgnaech yrhpgmedei cpyatfhllg freemdptka mnfqtfphqn ghagpvpgha
1801 gtmlppghpg hvhsrsgsqs mpranryqrk nsqggqssiy tpapeyddpa ncaeedqyrr
1861 ytrvnsqggs lysgpgpeyd dpancapeed qygsqyggpy gqpydhygsr gsmgrrsigs
1921 arnpgngspe pppppprnhd msnssfndsk esneiseaec drdhgprgny gavkrspqpk
1981 dqrtteemrk liernetgpk qlqlqqanga gftaydtmav
//