Warning: The NCBI web site requires JavaScript to function. more...
An official website of the United States government
The .gov means it's official. Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you're on a federal government site.
The site is secure. The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.
NCBI Reference Sequence: NP_001185598.1
Identical Proteins FASTA Graphics
LOCUS NP_001185598 826 aa linear PRI 07-SEP-2017 DEFINITION protocadherin alpha 5 precursor [Macaca mulatta]. ACCESSION NP_001185598 XP_001087166 VERSION NP_001185598.1 DBSOURCE REFSEQ: accession NM_001198669.1 KEYWORDS RefSeq. SOURCE Macaca mulatta (Rhesus monkey) ORGANISM Macaca mulatta Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca. REFERENCE 1 (residues 1 to 826) AUTHORS Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Marcais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA and Norgren RB Jr. TITLE A new rhesus macaque assembly and annotation for next-generation sequencing analyses JOURNAL Biol. Direct 9 (1), 20 (2014) PUBMED 25319552 REMARK Publication Status: Online-Only COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JSUE03037083.1. On Nov 3, 2010 this sequence version replaced XP_001087166.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. FEATURES Location/Qualifiers source 1..826 /organism="Macaca mulatta" /db_xref="taxon:9544" /chromosome="6" /map="6" Protein 1..826 /product="protocadherin alpha 5 precursor" /note="protocadherin alpha 6; protocadherin alpha 3; protocadherin alpha 13; protocadherin alpha 2" /calculated_mol_wt=87193 sig_peptide 1..28 /inference="COORDINATES: ab initio prediction:SignalP:4.0" /calculated_mol_wt=3252 Region 29..110 /region_name="Cadherin_2" /note="Cadherin-like; pfam08266" /db_xref="CDD:462413" Region 136..237 /region_name="Cadherin_repeat" /note="Cadherin tandem repeat domain; cd11304" /db_xref="CDD:206637" Site order(143..144,200,202,233,235..236) /site_type="other" /note="Ca2+ binding site [ion binding]" /db_xref="CDD:206637" Region 245..345 /region_name="Cadherin_repeat" /note="Cadherin tandem repeat domain; cd11304" /db_xref="CDD:206637" Site order(252..253,308,310,341,343..344) /site_type="other" /note="Ca2+ binding site [ion binding]" /db_xref="CDD:206637" Region 358..450 /region_name="Cadherin_repeat" /note="Cadherin tandem repeat domain; cd11304" /db_xref="CDD:206637" Site order(360..361,413,415,446,448..449) /site_type="other" /note="Ca2+ binding site [ion binding]" /db_xref="CDD:206637" Region 458..560 /region_name="Cadherin_repeat" /note="Cadherin tandem repeat domain; cd11304" /db_xref="CDD:206637" Site order(465..466,523,525,556,558..559) /site_type="other" /note="Ca2+ binding site [ion binding]" /db_xref="CDD:206637" Region 580..669 /region_name="Cadherin_repeat" /note="Cadherin tandem repeat domain; cd11304" /db_xref="CDD:206637" CDS 1..826 /gene="PCDHA5" /coded_by="NM_001198669.1:205..2685" /db_xref="GeneID:692083" ORIGIN 1 mvysrrespg srllllwlll vywkagsgql hysipeeakh gtfvgriaqd lglelaelvp 61 rlfrvaskgr rdllevnlqn gilfvnsrid reelcrrsae csihlevivd rplqvfhvev 121 avkdindnpp rfsrqeqrlf ilesrmpdsr fpvegasdld iganaqlryr lnpneyfdld 181 vktneeethf lelvlrksld reetqehrll viatdggqpe ltgtvqllin vldandnape 241 fdksiynvrl lenapsgtlv iklnasdade ginkdigyff snlvlddvks kfiinsntge 301 ikvkgeldye vcnsyeinid amdksafplt ghckvvvkll dvndntpema itslflpvke 361 dapvstvial itvsdrdsga ngqvtcslmp hvpfklvstf knyyslvlds aldresvsay 421 elvvtardgg spslwatasv svevadvndn apafaqseyt vfvkennppg chiftvsawd 481 adaqenalvs yslverrvge ralssyvsvh aqsgkvyvlq pldheqlell qfqvsardag 541 vpplgsnvtl qvfvldendn apallaprvg gtggavselv pwsvgagqvv akvravdpds 601 gynawlsyel qpepgsarip frvglytgei sttrsldete aprhrllvlv kdhgepalta 661 tatvlvslve sgqapkassr asagavgpea alvdvnvyli iaicavssll vltlllytal 721 rcsapptevv ctrgnptlvc ssavgswscs qqrrervcsa eappkmdlma fspslpqgpa 781 sadnvsflil tsnfpsqfln ikchihpvfl knyalvhkyc stqllh //
Whole sequence Selected region from: to:
Conserved Domains
Your browsing activity is empty.
Activity recording is turned off.
Turn recording back on