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protocadherin alpha 5 precursor [Macaca mulatta]

NCBI Reference Sequence: NP_001185598.1

Identical Proteins FASTA Graphics 

LOCUS       NP_001185598             826 aa            linear   PRI 07-SEP-2017
DEFINITION  protocadherin alpha 5 precursor [Macaca mulatta].
ACCESSION   NP_001185598 XP_001087166
VERSION     NP_001185598.1
DBSOURCE    REFSEQ: accession NM_001198669.1
KEYWORDS    RefSeq.
SOURCE      Macaca mulatta (Rhesus monkey)
  ORGANISM  Macaca mulatta
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Cercopithecidae; Cercopithecinae; Macaca.
REFERENCE   1  (residues 1 to 826)
  AUTHORS   Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S,
            Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Marcais G,
            Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA
            and Norgren RB Jr.
  TITLE     A new rhesus macaque assembly and annotation for next-generation
            sequencing analyses
  JOURNAL   Biol. Direct 9 (1), 20 (2014)
   PUBMED   25319552
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JSUE03037083.1.
            
            On Nov 3, 2010 this sequence version replaced XP_001087166.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Macaca mulatta"
                     /db_xref="taxon:9544"
                     /chromosome="6"
                     /map="6"
     Protein         1..826
                     /product="protocadherin alpha 5 precursor"
                     /note="protocadherin alpha 6; protocadherin alpha 3;
                     protocadherin alpha 13; protocadherin alpha 2"
                     /calculated_mol_wt=87193
     sig_peptide     1..28
                     /inference="COORDINATES: ab initio prediction:SignalP:4.0"
                     /calculated_mol_wt=3252
     Region          29..110
                     /region_name="Cadherin_2"
                     /note="Cadherin-like; pfam08266"
                     /db_xref="CDD:462413"
     Region          136..237
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(143..144,200,202,233,235..236)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          245..345
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(252..253,308,310,341,343..344)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          358..450
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(360..361,413,415,446,448..449)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          458..560
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(465..466,523,525,556,558..559)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          580..669
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..826
                     /gene="PCDHA5"
                     /coded_by="NM_001198669.1:205..2685"
                     /db_xref="GeneID:692083"
ORIGIN      
        1 mvysrrespg srllllwlll vywkagsgql hysipeeakh gtfvgriaqd lglelaelvp
       61 rlfrvaskgr rdllevnlqn gilfvnsrid reelcrrsae csihlevivd rplqvfhvev
      121 avkdindnpp rfsrqeqrlf ilesrmpdsr fpvegasdld iganaqlryr lnpneyfdld
      181 vktneeethf lelvlrksld reetqehrll viatdggqpe ltgtvqllin vldandnape
      241 fdksiynvrl lenapsgtlv iklnasdade ginkdigyff snlvlddvks kfiinsntge
      301 ikvkgeldye vcnsyeinid amdksafplt ghckvvvkll dvndntpema itslflpvke
      361 dapvstvial itvsdrdsga ngqvtcslmp hvpfklvstf knyyslvlds aldresvsay
      421 elvvtardgg spslwatasv svevadvndn apafaqseyt vfvkennppg chiftvsawd
      481 adaqenalvs yslverrvge ralssyvsvh aqsgkvyvlq pldheqlell qfqvsardag
      541 vpplgsnvtl qvfvldendn apallaprvg gtggavselv pwsvgagqvv akvravdpds
      601 gynawlsyel qpepgsarip frvglytgei sttrsldete aprhrllvlv kdhgepalta
      661 tatvlvslve sgqapkassr asagavgpea alvdvnvyli iaicavssll vltlllytal
      721 rcsapptevv ctrgnptlvc ssavgswscs qqrrervcsa eappkmdlma fspslpqgpa
      781 sadnvsflil tsnfpsqfln ikchihpvfl knyalvhkyc stqllh
//
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