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Submitted SNP(ss) Details: ss82950155           
Submitter
HandleHGSV
Submitter SNP IDCor19240_DIV_20070510.chr6_49636725-49636726_1
RefSNP(rs#)rs397970549
Submitted Batch IDNA19240-Fosmids-20070510-DIPs
Submitted DateDec 02, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPDec 2 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA19240-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleCT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize79255637 378-381 59 reverse 2

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss82950155|allelePos=501|len=1001|taxid=9606|alleles='CT/-'|mol=Genomic
 GCAATGGCAC GATCTGAGCT CACTGCAACC ACCTGCCTCC CGGGTTCAAG CTATTCTCCT
 GCCTCAGCCT CCTGAGTAGC TGGGATTACA GGCGCCTGCA ACCACACCCA GCTAATTTTT
 GTACTTTTAG TAGAGATGGG GTTTTGCCAT GTTGGCCAGG CTGGTCTCGA ACTCTTGACC
 TCAGGTGATC TGCCTGCCTC AGCCTCCCAA AGTGCTGGGA TTACAGGCTT GAGCCACCGA
 GCCTGGCCTC TACTTTTTAT TACTGTCATG TAGTTAGTGA TAAAATGCTT CTATCTGAAA
 AAAAATTTGT TGTTCTAAAT TCTAAAAAAT TCTCGTGATT ATTGCTTAAA TTTTAATAAA
 GCAGATGTGA TTTTCAAATT ACCACATTTT TATTTTTCTT TATTTTTTCT GTGTGGAAGG
 TCATTGAAAA GCCTCTATGT TGTCCTCCTA ATATCTCTGT CTCTCCATCA CCGTCTCTCT
 CTCTCTCTCT CTCTCTCTCT
 N
 GTCTGTCTCA CACATAAACT CAACTAAATG CATTCATTGT GAGAGTAATT TTTTTTTTTT
 TTGAGACAGA GTCTTTCTCT GTCGCCCAGG CTAGAGTTAA GTGGCACGAT ATCAGCTCAC
 TGCAACCTCT GCCTCCTGGG TTCAAGCGAT TCTCGTGCCT CAGCCTACCA GGTAGCTGAG
 ATTACGGGTG CGTGCAGCCA AACCTGGCTA ATTCTTGTAT TTTTAGTAGA GACGGAGTTT
 TTACTATGTT GGCCAGGCTG GTCTCAAACT CCTGACCTCA GGTGATCCCC CTGCCTTGGC
 CTCCCAAAGT GCTGGGATCA CAGGCATGAG CCACCGCGCC TGGCCAGGTT CAGAATCTTT
 AGAGCTCGCT TTGAGTGTAC CTTGTGTCTT CAATCCTTAT ATATAAATAC CTGCACTTCA
 AGAACAGATT TAACACAAAC AATACCACAG CAATTGTGGT GTCTGAGGAA GAGAACTTGA
 GTTACTTCTA TCCTGCCATT

  Submitted Frequency for ss82950155 back to top
There is no frequency submission for ss82950155.


  dbSNP summary of Genotypes for ss82950155 back to top
No sufficient data to compute Hardy-weinberg probability for ss82950155.


  Submitted individual genotype for ss82950155 back to top
There is no individual genotype data for ss82950155.

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