Submitter | Handle | HGSV | Submitter SNP ID | Cor12878_DIV_20070510.chr1_34085111-34085118_1 | RefSNP(rs#) | rs550425228 | Submitted Batch ID | NA12878-Fosmids-20070510-DIPs | Submitted Date | Nov 26, 2007 | Publication Cited | [1] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Nov 26 2007 12:00:00:000AM |
| Resource Links | Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | NA12878-FOSMIDS-DIPS | Ascertainment Samplesize | 3 | Population | N.D. |
| Allele | Observed Allele | -/AGAGAG | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | DIV | CpG Code | N.D. |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence position quality orientation DIPsize86346171 168-169 61 forward -6 |
>gnl|dbSNP|ss80834643|allelePos=501|len=706|taxid=9606|alleles='-/AGAGAG'|mol=Genomic CACATGGCCC AAATTACTCT CCTGCCCTTG CCCCAAACCC ATCTCTCCCC TGGGTTCCTT
GCATCTGGGA CTGGCCCATC ATCCAGCCAG CCATCCAAGC TGAGACCTCA TCTGGTCTCA
CACCCAGTCT CTTGAATTAC CTTCCTTCCA TCTCTCATAT CTGCCCCCAC CCCATTGCTC
AGGCTCCAGG ACCAGGCCCT ACCCTATCTC AGTTTCTTCT CTTGGACTTG GAGATAGCCT
CCTCATTGTT CTGTCTTCAG ACTTGCCCCA ATCCAACCCA TTCTCTAAAC AACTAGTAGG
ATCATGGCTC TTCCCTCCTA AAAGCGCTTC AGTTGGTGTC AAGCTCTAGA ATATCACTCA
AGGTCCTCCA TGAGCTAGCC CCACCCATGT CTCCAACTGT ACGTACCCGT CTCCTCCTCA
CACCCAATGT TCCAGCAACA ATGGCTCTCC TTATTTCTCC TCCAGCAGAG AGAGAGAGAG
AGAGAGAGAG AGAGAGAGAG
N
GAGAGTTTGT GTCTATAGTC ATGCTGGTGT GTTGGTGTTA CATGAGCATG TGTGTGTCTA
TATATGCATG TAAACTGCAT AACTATGAAA TGTGTGGGTA TGTGGGTATG TGCAGGGACA
TGGCATGTGG GTATTCAGGT AGGAGAGCCT GTTGAGGATG GGCATTGAGG GAAACGTGGT
TGAGAAGCCA GTGGTTGGCA TAGTT
There is no frequency submission for ss80834643.
No sufficient data to compute Hardy-weinberg probability for ss80834643.
There is no individual genotype data for ss80834643.
|