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Submitted SNP(ss) Details: ss79890562           
Submitter
HandleHGSV
Submitter SNP IDCor18507_DIV_20070510.chr3_15335059-15335060_1
RefSNP(rs#)rs59276192
Submitted Batch IDNA18507-Fosmids-20070510-DIPs
Submitted DateNov 23, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 23 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18507-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize63552604 86-88 49 forward 1

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss79890562|allelePos=501|len=1001|taxid=9606|alleles='A/-'|mol=Genomic
 CTCCCTGGCT GTGTGACCTG AGAGAATTGA CTTATTCACT CAGTGTCTCC CTTTCTCATC
 AACATTCTGA AGGACTGTTG TGAGAATGAA TAGGATAAAC TATAGTAGCC ACTTAGCACA
 AAACTTAGCA TATAATAACC TTTCACAAAA TAGTGGTTAT TTTTACTTAG GTGCCATTAT
 TTAATAACTG GCTAAGGGGC TGGAGGAGGA AAGGATCAAC ATTTGTTGGA CATATATGCC
 AGGTACCATG CCAGACACTT AACGAACATC ACCATATTTA ACCCTTAACA GCCCTGGTAA
 GACAGGTATT GCCCTTCACA TTTTAGAAGG AAATTAAACC TAGATAAGCT GATATAACTT
 ACCAAGACTG TACGGCACAT TAAGAGGCAG AGAGAGAATT CAAATCCAGC TCTGAGCTCC
 AAAGCCCACA CTTTCCACCA TCATATGCTA TGCAGCTATG TAGTTTAGTT TCTGTCAGCT
 CCAAAAAAAA AAAAAAAAAA
 N
 GCTTTCCTAT GTTTTTGTTT TTGTTTTTTT TAAGACAAGA GTCTCGCTTT GTCACCCAGG
 CTGGAGTGCA GTGGCATGAC CTTGGCTCAC TACAACCTCC ACCTCCCAGG TTCAAACGAT
 TCTTGTGCCT CAGCCTCCCA AGTAGCTGGG ATTACAGGCA TGCACTGCAA TACCTGGTTA
 CTACTTTTTC TTTTTTGTAT TTTAGTAGAG ATAGGGTTTC GCCATGTTAG CCAAGCTGGT
 CCCAAATTCG TAGCCTCAAG CCATCTGCTG GCCTCGGCCT CCCAAACTAC TGGGATTATG
 GGCGTGAGCC ACTGCGCCCA GCCTCCTATG CTTTTTTGAC CCGAAGTTTC ATAACATTGA
 AGTGTGGTTT TAACAAGTTC CAAGTGGGGA AGCAGATTTA ATTTCTATCA AATAAATGCA
 ATACCGGGAC TCTCTTTCCC CAGAGAAGAC CCAGCAAAAC CAGTGGCAGG GAAAGAAAAC
 AGCACATCTA TCTGGAATAG

  Submitted Frequency for ss79890562 back to top
There is no frequency submission for ss79890562.


  dbSNP summary of Genotypes for ss79890562 back to top
No sufficient data to compute Hardy-weinberg probability for ss79890562.


  Submitted individual genotype for ss79890562 back to top
There is no individual genotype data for ss79890562.

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