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Submitted SNP(ss) Details: ss77960800           
Submitter
HandleHGSV
Submitter SNP IDCor12156_DIV_20070510.chr2_38180237-38180238_1
RefSNP(rs#)rs3057329
Submitted Batch IDNA12156-Fosmids-20070510-DIPs
Submitted DateOct 15, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 15 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12156-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleTTT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize105724047 351-355 57 reverse 3

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss77960800|allelePos=501|len=1001|taxid=9606|alleles='TTT/-'|mol=Genomic
 ATTTTTACCT AGGTATTTCA TTTTTGTGCT ATTGGAAATG CTATTGTGTT TTTAATTTCA
 AATTCCAATT GTTTATTACA AGTATATAGG AAAGCAATTG ACTTTTGTAT ATTAACCTTG
 TATCCTGCTA TAATTGTTTA TTAGTTGAAG GAGGTTTGGG TTCATTTTGG GGGGTTTTCT
 ACATAGCCTA ACTTCTCCAG TTTCACCATC TGACTCGGGA TGTCAAGGAT CAGGCCTTGC
 TATAAGAATT AAATGAGACA ATCAACACTA AGGCACCCAG CAGTGTCTGA CAAATGCACA
 CTGTATCTAC TACCTGCCCT CCTCTCCTAC TACTTCTTAG CATGTGTTCC TCCTTGATTT
 TTTCCTGTTT TCTTTTAGAG GTTTTATAGT TTCAAATTTT ATATTTATAA CCATGATGCA
 TTTGAGTCAG ACATGTCATC TACAAAGACA GTTTTATTTC TTCTTTCCTC ATTTTTTTTA
 TTGGTTTTTT TTTTTTTTTT
 N
 GGACGTTTTG TACTAAGCAG GACTTCCAAT ATGATGTTGA ATAAGACTGG TGAGAGGAGA
 CATATATACT TTGTTCCCAA TCTTGAGGAG AAAGTACCCA GTTTCTTACC ATTAACTATG
 ATGTTAACTG TCGGCCTTTT GTAGATCTTC TTTATCAAGA TGAGAAAATT CCTCCTTTTT
 ACTGAGAGTT TTTGCTGAGA GTTTTTATCA TGAATGGGTG TTGGATTTTG TCAGATGGTT
 TTTCTGCATT GATTGATATG ATTATATGAA TCTTCCTTTT TAGTGTATTA ATGTGATAGA
 TCATATTAAT TAATTTTCAA ATGTAGATTA AGCCTTGCAA ATCTTGAATA AACCCCACTT
 GGGCACAGAG TATGGTTGTA GTTTTTTTTA TACAGTGTTA GATTCAGTTT GCTTATATCT
 TCTTAAGGAT TATTTTATCA TTTTCATAAA AGATATTGGT TTGTTGTTTT TCTTTCTTGT
 GCTCTCTTTG TCTGATTTTG

  Submitted Frequency for ss77960800 back to top
There is no frequency submission for ss77960800.


  dbSNP summary of Genotypes for ss77960800 back to top
No sufficient data to compute Hardy-weinberg probability for ss77960800.


  Submitted individual genotype for ss77960800 back to top
There is no individual genotype data for ss77960800.

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