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Submitted SNP(ss) Details: ss2838878978           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_6_49524967
RefSNP(rs#)rs1489435177
Submitted Batch IDgenome_batch_chr6
Submitted DateMay 18, 2017
Publication CitedN.D.
First entry to dbSNPMay 18 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed Allele-/AAT
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2838878978|allelePos=26|len=51|taxid=9606|alleles='-/AAT'|mol=Genomic
 CAACAAGAGC AAAACTCCAT CTCAA
 N
 AATAATAATA ATAATTAATA AATAA

  Submitted Frequency for ss2838878978 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
FEMALE13852-=0.99992782
AAT=0.00007219
gnomad-FEMALEGNOMAD
FIN3488-=1.00000000
AAT=0.00000000
gnomad-FINGNOMAD
MALE17116-=0.99988317
AAT=0.00011685
gnomad-MALEGNOMAD
ASJ302-=1.00000000
AAT=0.00000000
gnomad-ASJGNOMAD
AMR836-=1.00000000
AAT=0.00000000
gnomad-AMRGNOMAD
OTH980-=1.00000000
AAT=0.00000000
gnomad-OTHGNOMAD
AFR8730-=0.99988544
AAT=0.00011455
gnomad-AFRGNOMAD
EAS1622-=1.00000000
AAT=0.00000000
gnomad-EASGNOMAD
NFE15010-=0.99986678
AAT=0.00013324
gnomad-NFEGNOMAD


  dbSNP summary of Genotypes for ss2838878978 back to top
No sufficient data to compute Hardy-weinberg probability for ss2838878978.


  Submitted individual genotype for ss2838878978 back to top
There is no individual genotype data for ss2838878978.

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