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Submitted SNP(ss) Details: ss2788091449           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_2_239053036
RefSNP(rs#)rs1489653105
Submitted Batch IDgenome_batch_chr2
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed Allele-/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2788091449|allelePos=26|len=51|taxid=9606|alleles='-/C'|mol=Genomic
 GAAGGAAGGA AGGAAGGAAG GAAGG
 N
 AAGGAAGGAA GGAAGGAAGG AAGGA

  Submitted Frequency for ss2788091449 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AMR622-=1.00000000
C=0.00000000
gnomad-AMRGNOMAD
MALE12486-=0.99983984
C=0.00016018
gnomad-MALEGNOMAD
ASJ210-=1.00000000
C=0.00000000
gnomad-ASJGNOMAD
FIN2940-=1.00000000
C=0.00000000
gnomad-FINGNOMAD
OTH706-=1.00000000
C=0.00000000
gnomad-OTHGNOMAD
AFR6140-=1.00000000
C=0.00000000
gnomad-AFRGNOMAD
EAS1186-=0.99831367
C=0.00168634
gnomad-EASGNOMAD
FEMALE10186-=1.00000000
C=0.00000000
gnomad-FEMALEGNOMAD
NFE10868-=1.00000000
C=0.00000000
gnomad-NFEGNOMAD


  dbSNP summary of Genotypes for ss2788091449 back to top
No sufficient data to compute Hardy-weinberg probability for ss2788091449.


  Submitted individual genotype for ss2788091449 back to top
There is no individual genotype data for ss2788091449.

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