NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss3204921           
Submitter
HandleYUSUKE
Submitter SNP IDIMS-JST065005
RefSNP(rs#)rs2270482
Submitted Batch IDIMS-JST:20010831:164321
Submitted DateSep 05, 2001
Publication Cited12436197
First entry to dbSNPSep 5 2001 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodPCR_Seq
Ascertainment Samplesize42
PopulationPOP_J
Allele
Observed AlleleC/T
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss3204921|allelePos=61|len=121|taxid=9606|alleles='C/T'|mol=Genomic
 ACACCGACTG CTAGGGATTT CATTTTCCCT GAGACCCCAT CCACTCACCA CACTGACTAC
 Y
 TCTTCCTTTA TAGGGAGTTG TTCTCCCTAC AGAATTGTGT GTGTGTGTCT TTTACCAAAC

  Submitted Frequency for ss3204921 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
JBIC-allele
EAST ASIA
1502C=0.94669998
T=0.05330000
0.101 +/-0.015IMS-JBIC:20020820:140704YUSUKE


  dbSNP summary of Genotypes for ss3204921 back to top
No sufficient data to compute Hardy-weinberg probability for ss3204921.


  Submitted individual genotype for ss3204921 back to top
There is no individual genotype data for ss3204921.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement