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Submitted SNP(ss) Details: ss28532783           
Submitter
HandleABI
Submitter SNP IDhCV127857
RefSNP(rs#)rs17879541
Submitted Batch IDxplore_hum_chr17_1
Submitted DateJul 18, 2005
Publication CitedN.D.
First entry to dbSNPNov 10 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodXPLORE
Ascertainment Samplesize10
PopulationCelera_Donors
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 4
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss28532783|allelePos=301|len=601|taxid=9606|alleles='A/G'|mol=Genomic
 ACCAGCCTGG TCAATACAGC GAAACCCCAT CTCTACTAAA AATACAAAAA AAAAAAAATT
 AGCCAGGCAT GGAGGCACAC TCCTGTAGCC CTAGCTACTC GGGAGGCTGA GGCAGGAGAA
 TCACTTGAAC CCGGGAGGCG GAGGTTGCAG TGAGCCGAGA TCAGGCCACT GCGCTCCAGC
 CTGGGTGACA AAGGGAGACG TTATCTCAAA AAAAAACAAA AAAATTCCCA GCCAGCAAAT
 ACATGTTATT GGAACTTATC TTTTATCTGA AAAATACAGC AGACTAGACA AACATTGTAG
 R
 ATTTCTTAAT ATTCTAACAG CAACAGCACA CTAGCGATCC CTTAGGGACC CTGGTTATGC
 ACAGAACGGA GCTCCAAGGA GGGGGACGGC AGGTCGGGGC CGGGGGAGCC AGGCCTGGCC
 CTGGGCCTTA GAAATCCCAG CTGGGGATTT CACTCACGCT GCTCAAGTCA GCAGGCTGCA
 GCCGGGGAAT GAACTGAGGG CCTCGGATAC CACGTGGGGG TGTTTTCGAC TTTATGCTGC
 TGGCAGTAGG GAGCCACTGA AGGCTTCGGG GGGAGGGAGG GGGACAGTGA CCTAATCGGA

  Submitted Frequency for ss28532783 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AoD_Japanese
EAST ASIA
90A=0.58999997
G=0.41000000
xplore_hum_chr17_1ABI
AoD_African_American
NORTH AMERICA
90G=0.68000001
A=0.31999999
xplore_hum_chr17_1ABI
AoD_Caucasian
NORTH AMERICA
92G=0.68000001
A=0.31999999
xplore_hum_chr17_1ABI
AoD_Chinese
EAST ASIA
90G=0.50999999
A=0.49000001
xplore_hum_chr17_1ABI


  dbSNP summary of Genotypes for ss28532783 back to top
No sufficient data to compute Hardy-weinberg probability for ss28532783.


  Submitted individual genotype for ss28532783 back to top
There is no individual genotype data for ss28532783.

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