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Submitted SNP(ss) Details: ss162980622           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_555454
RefSNP(rs#)rs7416152
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss162980622|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 ATAGCCCCCT TTCACTTCTG AGTCCCAGAG GTTACCCAAG GCACCCCTCT GACATCCGGC
 CTGCTCCTTC TCACATGACA AAAACTAGCC CCCATCTCAA TCATATACCA AATTTCTCCC
 TCATTAAACG TAAGCCTTCT CCTCACTCTT TCAATCTTAT CCATCATGGC AGGCAGTTGA
 GGTGGATTAA ACCAAACCCA ACTACGCAAA ATCTTAGCAT ACTCCTCAAT TACCCACATA
 GGATGAATAA
 Y
 AGCAGTTCTA CCGTACAACC CTAACATAAC CATTCTTAAT TTAACTATTT ATATTATCCT
 AACTACTACC GCATTCCTAC TACTCAACTT AAACTCCAGC ACCACAACCC TACTACTATC
 TCGCACCTGA AACAAGCTAA CATGACTAAC ACCCTTAATT CCATCCACCC TCCTCTCCCT
 AGGAGGCCTG CCCCCGCTAA CCGGCTTTTT GCCCAAATGG GCCATTATCG AAGAATTCAC
 AAAAAACAAT

  Submitted Frequency for ss162980622 back to top
There is no frequency submission for ss162980622.


  dbSNP summary of Genotypes for ss162980622 back to top
No sufficient data to compute Hardy-weinberg probability for ss162980622.


  Submitted individual genotype for ss162980622 back to top
There is no individual genotype data for ss162980622.

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