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Submitted SNP(ss) Details: ss11138989           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDchr2.NT_005079.12_3844299
RefSNP(rs#)rs2259916
Submitted Batch IDWI-WGS-200310
Submitted DateOct 31, 2003
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJul 3 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodWI-WGS-200310
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS213P69044RA8.T0 -648 36S213P61007RF3.T1 679 34S213P69033RA5.T0 -643 36

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss11138989|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 GGGGAGCTTA CAAATAACAA AAATGTATAT CCCAAGTGAA AATTAGAATG TCTATGGAAC
 TAGTAGCAGT AACAACAGTA GACGAAAGAT AGGCTGTAGA TGTGAAGAAG ATGTCTACAA
 GGGAAGCACA AGACTCCAAA TGCTCTTGCT ACTAAAACGC AGATTCAAGC TTTACCATCT
 GTAATACTCT GCTGCCAAGT
 R
 CATCTATGGC CACTGGTACT GTCTAAAATG AGGATGTATA TTATTAAATC ATCAAAAAGG
 ACTGCATAGC AGAAACTTTT CTGATATCAA GGGATCGACT TAACTACAAT TATATACAGG
 TGCCAATTTC CTCTGGAGTA AACTACCACA CGGGGCCTCA TGTACCAGTT AGATAATCCA
 AGTCAGCCTT TATTGCATAA

  Submitted Frequency for ss11138989 back to top
There is no frequency submission for ss11138989.


  dbSNP summary of Genotypes for ss11138989 back to top
No sufficient data to compute Hardy-weinberg probability for ss11138989.


  Submitted individual genotype for ss11138989 back to top
There is no individual genotype data for ss11138989.

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