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Submitted SNP(ss) Details: ss11131225           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDchr1.NT_077933.1_48513
RefSNP(rs#)rs4649575
Submitted Batch IDWI-WGS-200310
Submitted DateOct 31, 2003
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJul 3 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWI-WGS-200310
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS213P61248RA10.T0 716 24

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss11131225|allelePos=501|len=1001|taxid=9606|alleles='A/G'|mol=Genomic
 TATTTAGAAA TATTCTCTTC ATAAAACTCT CTGTAGGCTG GGTGCAGTGG CTCATGCCTG
 CAATCCCAGC ACTTTGGGAG GCCGAGGCGG GCAGATCATG AGGTCAAGAG ATCGAGACCA
 TCCTGGCCAA CACAGTGAAA CCCCGTCTCT ACTAAAAATA CAAAAAATTA GCCAGGTGTG
 GTGGCGGGTG CCTGTAGTCC CAGCTACTCC AGAGGCTGAG GCAGGAGAAT GGCGTGAACC
 CAGGAGTCGG AGCTTGCAGT GAGCCGAGAT CATGCCACTG CACTCCAGCC TGGGGGACAG
 AGCGAGACTC CATCTCAAAA AAGAAAAAAA CCTCTCTTTA AATCACACAT TCGAGTGTGC
 CCTTTGTTTC TCATCAAAGC CAAGACTGAT TTGAGATGAT TTCTTAAGGT CAGGTTAATG
 TCTTAATCCA GTTGTGCTGC TATAACAAAA TACCACAGAG TGAGTAACTT ATAAACAACA
 AAAATTTATT GCTCACAGTT
 R
 TGGAGGATGG TCAGTCTAAG ATCAAGTTGC CAGCAGGTTC AGTGTCTAGT GAAGGCCCAT
 TCCTCTGTCA CCCAGGCTGA AGTGCAGTGT TGCAAGCTTG GGTCACTGCA ACCTTCACCT
 CCCAGGCTCA AGTAATCCTC CCACCTCAGC CTCCTGAGTA GCTGGGCCAC AGGTGCTCAC
 TACCATGCCT GGCTAATTTT TTTTTTTTTT TTTTTTTTTT TTTTTGGTAG AAATGGGGTT
 TCACCATGTT TCCCAGGCTG GTCTCAAACT CTTGGACTCA GGCAATCTGT CAGCCTCCTA
 AAGGAGTGCT GGGATTACAG GCATGAGCCA CCGTGCCCAC CCCCCAAATT CTACTAATAT
 ATGTGCATAA TTAAATAGTT ACCAGCCATC ATTTTCTGAT ACTTTGGCAA TTGGTTGAAA
 GAGTTTATCT AAAGACCTGG AATCCATAGA AGGCAGTCTC TGTGTTAAGG GGTTGTTCTT
 ATTATGCAGA TGAAGCCTCC

  Submitted Frequency for ss11131225 back to top
There is no frequency submission for ss11131225.


  dbSNP summary of Genotypes for ss11131225 back to top
No sufficient data to compute Hardy-weinberg probability for ss11131225.


  Submitted individual genotype for ss11131225 back to top
There is no individual genotype data for ss11131225.

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