NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss107938273           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_19_chr1_747799
RefSNP(rs#)rs4951862
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:97

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938273|allelePos=201|len=401|taxid=9606|alleles='C/A'|mol=Genomic
 TGCCTGGCTA GCAGATCCAC GCTGTCTATA CTACCTCCCT GTCCAGTAGA CCCACCCTGT
 CTATACTACC TCCCTGGCCA GCAGATCCAC CCTGTCTATA CTACCTGCCT GGCCAGCAGA
 TCCACCCTGT CTATACTACC TGACTGGCCA GCAGATCCAC CCTGTCTACA CTACCTGCCT
 GCCCAGAAGA TGCGCCATGT
 M
 TACACTACCT GCTTGTCCAG CAGATCCACC CTGTCTACAC TAGCTGCCTG TCCAGCATGT
 CCACCCTATC TACACTACCT GCCTGTCCAG CAGATCCACC CTGTCTATAC TACCTGCCTA
 TCCAGCAGAT CTACCCTGTC TACACTACCT GCCTGCTCAG CAGATCCACC CTGTCTATAC
 TAACTGCCTG GCCAGCAGAT

  Submitted Frequency for ss107938273 back to top
There is no frequency submission for ss107938273.


  dbSNP summary of Genotypes for ss107938273 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938273.


  Submitted individual genotype for ss107938273 back to top
There is no individual genotype data for ss107938273.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement