U.S. flag

An official website of the United States government

speB agmatinase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947715, updated on 3-Dec-2024

Summary

Official Symbol
speB
Official Full Name
agmatinase
Primary source
ECOCYC:EG10960
Locus tag
b2937
See related
ASAP:ABE-0009632
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2932
Summary
HT_Cmplx35_Cyt: [More information is available at EcoGene: EG10960]. Agmatinase (SpeB) carries out the second step in putrescine biosynthesis, generating the pathway's putrescine product. [More information is available at EcoCyc: EG10960].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Sequence:
NC_000913.3 (3082877..3083797, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene transketolase 1 Neighboring gene metalloprotease LoiP Neighboring gene biosynthetic arginine decarboxylase Neighboring gene acid stress response protein YqgB

Interactions

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables agmatinase activity  
enables agmatinase activity PubMed 
enables agmatinase activity  
enables hydrolase activity  
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines  
enables identical protein binding PubMed 
enables manganese ion binding PubMed 
enables manganese ion binding  
enables metal ion binding  
Component Evidence Code Pubs
located_in cytosol PubMed 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3082877..3083797 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417412.1 agmatinase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417412.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376UHZ9
    Conserved Domains (1) summary
    PRK02190
    Location:7306
    PRK02190; agmatinase; Provisional
External link. Please review our privacy policy.