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1700084F23Rik RIKEN cDNA 1700084F23 gene [ Mus musculus (house mouse) ]

Gene ID: 74280, updated on 22-Oct-2024

Summary

Official Symbol
1700084F23Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700084F23 geneprovided by MGI
Primary source
MGI:MGI:1921530
See related
Ensembl:ENSMUSG00000099639 AllianceGenome:MGI:1921530
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700003E18Rik; 4930589D02Rik
Expression
Restricted expression toward testis adult (RPKM 8.5) See more
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Genomic context

See 1700084F23Rik in Genome Data Viewer
Location:
13; 13 C1
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (70152169..70176467, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (70004050..70028348, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4933416O17 gene Neighboring gene STARR-seq mESC enhancer starr_34946 Neighboring gene predicted gene, 36019 Neighboring gene predicted gene, 47655 Neighboring gene predicted gene 3772 Neighboring gene STARR-seq mESC enhancer starr_34947 Neighboring gene STARR-seq mESC enhancer starr_34948 Neighboring gene STARR-seq mESC enhancer starr_34949 Neighboring gene STARR-seq mESC enhancer starr_34950 Neighboring gene STARR-seq mESC enhancer starr_34951 Neighboring gene predicted gene, 26018 Neighboring gene RIKEN cDNA 4930520P13 gene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Component Evidence Code Pubs
is_active_in cellular_component  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045965.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AK006991
    Related
    ENSMUST00000258653.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    70152169..70176467 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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