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Wdr26 WD repeat domain 26 [ Rattus norvegicus (Norway rat) ]

Gene ID: 498301, updated on 4-Jan-2025

Summary

Official Symbol
Wdr26provided by RGD
Official Full Name
WD repeat domain 26provided by RGD
Primary source
RGD:1565589
See related
EnsemblRapid:ENSRNOG00000003723 AllianceGenome:RGD:1565589
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1565589
Summary
Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be located in cytosol; mitochondrion; and nucleoplasm. Predicted to be part of GID complex. Orthologous to human WDR26 (WD repeat domain 26). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Spleen (RPKM 380.4), Adrenal (RPKM 337.9) and 9 other tissues See more
Orthologs
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Genomic context

See Wdr26 in Genome Data Viewer
Location:
13q26
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (95462017..95503826, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (92930282..92972061, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (99493117..99532775, complement)

Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene nuclear VCP-like Neighboring gene cornichon family member 4 Neighboring gene glutamic acid-rich protein-like Neighboring gene cornichon family AMPA receptor auxiliary protein 3 Neighboring gene coiled-coil domain containing 121, retrogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Interactions

General gene information

Gene Ontology Provided by RGD

Component Evidence Code Pubs
part_of GID complex  
located_in cytoplasm  
located_in cytosol  
located_in cytosol  
located_in mitochondrion  
located_in mitochondrion  
located_in nucleoplasm  
located_in nucleoplasm  
located_in nucleus  
part_of ubiquitin ligase complex  

General protein information

Preferred Names
WD repeat-containing protein 26

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109081.2NP_001102551.2  WD repeat-containing protein 26 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000013
    UniProtKB/TrEMBL
    A0A8L2Q1C0
    Related
    ENSRNOP00000005059.6, ENSRNOT00000005059.7
  2. NM_001401444.1NP_001388373.1  WD repeat-containing protein 26 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000013
    UniProtKB/TrEMBL
    A0A8L2Q1C0

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086031.1 Reference GRCr8

    Range
    95462017..95503826 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063272548.1XP_063128618.1  WD repeat-containing protein 26 isoform X1

    UniProtKB/TrEMBL
    A0A8L2Q1C0
    Related
    ENSRNOP00000101710.1, ENSRNOT00000134715.1

RNA

  1. XR_005492275.2 RNA Sequence

  2. XR_005492274.2 RNA Sequence

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