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Plant invertase/pectin methylesterase inhibitor superfamily [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838078, updated on 18-Sep-2024

Summary

Official Full Name
Plant invertase/pectin methylesterase inhibitor superfamily
Primary source
TAIR:AT1G02810
Locus tag
AT1G02810
See related
Araport:AT1G02810
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F22D16.20; F22D16_20
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Genomic context

Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (618061..620502)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene polygalacturonase 4 Neighboring gene cellulase 2 Neighboring gene pectinesterase (Protein of unknown function, DUF538) Neighboring gene pectinesterase (Protein of unknown function, DUF538)

Interactions

General gene information

NM_100160.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables enzyme inhibitor activity  
enables pectinesterase activity  
Process Evidence Code Pubs
involved_in cell wall modification  
involved_in pectin catabolic process  
Component Evidence Code Pubs
located_in chloroplast  

General protein information

Preferred Names
Plant invertase/pectin methylesterase inhibitor superfamily
NP_563662.1
  • Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2709 Blast hits to 2654 proteins in 327 species: Archae - 6; Bacteria - 603; Metazoa - 3; Fungi - 204; Plants - 1867; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    618061..620502
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100160.4NP_563662.1  Plant invertase/pectin methylesterase inhibitor superfamily [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_563662.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WPU4, Q9SRX4
    UniProtKB/TrEMBL
    A0A178WLT4, A0A654E6L4
    Conserved Domains (1) summary
    PLN02713
    Location:2579
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
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