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RNI-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832398, updated on 18-Sep-2024

Summary

Official Full Name
RNI-like superfamily protein
Primary source
TAIR:AT5G23340
Locus tag
AT5G23340
See related
Araport:AT5G23340
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MKD15.20; MKD15_20
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Genomic context

Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (7856039..7858319)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene S-isoprenylcysteine O-methyltransferase Neighboring gene Nucleotidylyl transferase superfamily protein Neighboring gene GRAM domain protein/ABA-responsive-like protein Neighboring gene GRAM domain-containing protein / ABA-responsive protein-like protein

Interactions

General gene information

NM_122240.4

Gene Ontology Provided by TAIR

General protein information

Preferred Names
RNI-like superfamily protein
NP_197725.1
  • RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    7856039..7858319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_122240.4NP_197725.1  RNI-like superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197725.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UH53, Q9FMW7
    Conserved Domains (3) summary
    cd09293
    Location:85323
    AMN1; Antagonist of mitotic exit network protein 1
    sd00034
    Location:6899
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam18511
    Location:1248
    F-box_5
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