U.S. flag

An official website of the United States government

Zinc-binding dehydrogenase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842867, updated on 18-Sep-2024

Summary

Official Full Name
Zinc-binding dehydrogenase family protein
Primary source
TAIR:AT1G65560
Locus tag
AT1G65560
See related
Araport:AT1G65560
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F5I14.9; F5I14_9
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (24371387..24373823, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene LETM1-like protein Neighboring gene uncharacterized protein Neighboring gene Xanthine/uracil permease family protein Neighboring gene Pectin lyase-like superfamily protein Neighboring gene ncRNA

General gene information

NM_001334215.1
NM_105230.5

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in cytoplasm  
located_in nucleus PubMed 

General protein information

Preferred Names
Zinc-binding dehydrogenase family protein
NP_176734.1
  • Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 16645 Blast hits to 16624 proteins in 1782 species: Archae - 118; Bacteria - 9540; Metazoa - 863; Fungi - 1044; Plants - 588; Viruses - 0; Other Eukaryotes - 4492 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    24371387..24373823 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105230.5NP_176734.1  Zinc-binding dehydrogenase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176734.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WSG4, A0A654ELB2, F4IBH8
    Conserved Domains (2) summary
    cd08295
    Location:7347
    double_bond_reductase_like; Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase
    PLN03154
    Location:1350
    PLN03154; putative allyl alcohol dehydrogenase; Provisional
  2. NM_001334215.1NP_001322310.1  Zinc-binding dehydrogenase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WEY6, A0A1P8ATL5
External link. Please review our privacy policy.