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HCF164 Thioredoxin superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829874, updated on 18-Sep-2024

Summary

Official Symbol
HCF164
Official Full Name
Thioredoxin superfamily protein
Primary source
TAIR:AT4G37200
Locus tag
AT4G37200
See related
Araport:AT4G37200
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AP22.37; AP22_37; HIGH CHLOROPHYLL FLUORESCENCE 164
Summary
Encodes thioredoxin-like protein with disulfide reductase activity that is involved in the biogenesis of the plastid cytochrome b6f complex. Protein is located in the thylakoid membrane with the C-terminal hydrophilic portion, containing the thioredoxin like domain, extending into the thylakoid lumen.
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Genomic context

See HCF164 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Sequence:
Chromosome: 4; NC_003075.7 (17509621..17511364, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene tRNA-Glu Neighboring gene Homeodomain-like superfamily protein Neighboring gene plasma membrane, autoregulation-binding site, misato segment II, myosin-like, tubulin/FtsZ protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene Cold acclimation protein WCOR413 family

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

General gene information

NM_119883.3

Gene Ontology Provided by TAIR

General protein information

Preferred Names
Thioredoxin superfamily protein
NP_195437.1
  • HIGH CHLOROPHYLL FLUORESCENCE 164 (HCF164); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cytochrome b6f complex assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast thylakoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin X (TAIR:AT1G50320.1); Has 12708 Blast hits to 12383 proteins in 2440 species: Archae - 136; Bacteria - 7708; Metazoa - 1002; Fungi - 428; Plants - 950; Viruses - 3; Other Eukaryotes - 2481 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    17509621..17511364 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119883.3NP_195437.1  Thioredoxin superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195437.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O23166
    UniProtKB/TrEMBL
    A0A178V430, A0A5S9Y1L4
    Conserved Domains (1) summary
    cd02950
    Location:119260
    TxlA; TRX-like protein A (TxlA) family; TxlA was originally isolated from the cyanobacterium Synechococcus. It is found only in oxygenic photosynthetic organisms. TRX is a small enzyme that participate in redox reactions, via the reversible oxidation of an ...
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