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CwfJ-like family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842082, updated on 18-Sep-2024

Summary

Official Full Name
CwfJ-like family protein
Primary source
TAIR:AT1G56290
Locus tag
AT1G56290
See related
Araport:AT1G56290
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14G9.10; F14G9_10
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Genomic context

Location:
chromosome: 1
Exon count:
8
Sequence:
Chromosome: 1; NC_003070.9 (21075262..21078797)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene RPB1a Neighboring gene drought-induced 19 Neighboring gene Chaperone DnaJ-domain superfamily protein Neighboring gene Polynucleotidyl transferase, ribonuclease H-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene secretion-associated RAS 1B

Interactions

General gene information

NM_104508.2

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus  

General protein information

Preferred Names
CwfJ-like family protein
NP_564716.1
  • CwfJ-like family protein; CONTAINS InterPro DOMAIN/s: Cwf19-like, C-terminal domain-1 (InterPro:IPR006768), Cwf19-like protein, C-terminal domain-2 (InterPro:IPR006767); BEST Arabidopsis thaliana protein match is: CwfJ-like family protein / zinc finger (CCCH-type) family protein (TAIR:AT5G56900.2); Has 2474 Blast hits to 2009 proteins in 284 species: Archae - 2; Bacteria - 39; Metazoa - 1047; Fungi - 300; Plants - 173; Viruses - 2; Other Eukaryotes - 911 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    21075262..21078797
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104508.2NP_564716.1  CwfJ-like family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564716.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WA55, Q93ZX4
    Conserved Domains (2) summary
    pfam04676
    Location:591688
    CwfJ_C_2; Protein similar to CwfJ C-terminus 2
    pfam04677
    Location:458582
    CwfJ_C_1; Protein similar to CwfJ C-terminus 1
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