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Target of Myb protein 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 844033, updated on 18-Sep-2024

Summary

Official Full Name
Target of Myb protein 1
Primary source
TAIR:AT1G76970
Locus tag
AT1G76970
See related
Araport:AT1G76970
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F22K20.7; F22K20_7
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Genomic context

Location:
chromosome: 1
Exon count:
9
Sequence:
Chromosome: 1; NC_003070.9 (28922415..28925468, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene patatin-like phospholipase domain protein Neighboring gene ncRNA

General gene information

NM_001334751.1
NM_001334752.1
NM_001334753.1
NM_001334754.1
NM_001334755.1
NM_001334756.1
NM_106348.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables phosphatidylinositol binding  
enables ubiquitin binding  
Component Evidence Code Pubs
located_in Golgi apparatus  
located_in cytoplasm PubMed 

General protein information

Preferred Names
Target of Myb protein 1
NP_177823.2
  • Target of Myb protein 1; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), Target of Myb protein 1 (InterPro:IPR014645), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: Target of Myb protein 1 (TAIR:AT1G21380.1); Has 1693 Blast hits to 1685 proteins in 202 species: Archae - 0; Bacteria - 2; Metazoa - 883; Fungi - 448; Plants - 280; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    28922415..28925468 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106348.4NP_177823.2  Target of Myb protein 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177823.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O49283, Q6NQK0
    UniProtKB/TrEMBL
    A0A178WMY8
    Conserved Domains (2) summary
    cd03561
    Location:10135
    VHS; VHS domain family; The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal Transducing Adaptor Molecule). It has a superhelical structure similar to that of the ...
    cd14231
    Location:180258
    GAT_GGA_like_plant; GAT domain found in uncharacterized Golgi-localized gamma ear-containing Arf-binding protein (GGA)-like proteins mainly found in plants
  2. NM_001334753.1NP_001321324.1  Target of Myb protein 1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WPY9, A0A1P8AQI5
  3. NM_001334752.1NP_001321321.1  Target of Myb protein 1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O49283, Q6NQK0
    UniProtKB/TrEMBL
    A0A178WMY8
    Conserved Domains (2) summary
    cd03561
    Location:10135
    VHS; VHS domain family; The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal Transducing Adaptor Molecule). It has a superhelical structure similar to that of the ...
    cd14231
    Location:180258
    GAT_GGA_like_plant; GAT domain found in uncharacterized Golgi-localized gamma ear-containing Arf-binding protein (GGA)-like proteins mainly found in plants
  4. NM_001334751.1NP_001321325.1  Target of Myb protein 1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O49283, Q6NQK0
    UniProtKB/TrEMBL
    A0A178WMY8
    Conserved Domains (2) summary
    cd03561
    Location:10135
    VHS; VHS domain family; The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal Transducing Adaptor Molecule). It has a superhelical structure similar to that of the ...
    cd14231
    Location:180258
    GAT_GGA_like_plant; GAT domain found in uncharacterized Golgi-localized gamma ear-containing Arf-binding protein (GGA)-like proteins mainly found in plants
  5. NM_001334754.1NP_001321322.1  Target of Myb protein 1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WPY9, A0A1P8AQI3
  6. NM_001334755.1NP_001321323.1  Target of Myb protein 1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O49283, Q6NQK0
    UniProtKB/TrEMBL
    A0A178WMY8
    Conserved Domains (2) summary
    cd03561
    Location:10135
    VHS; VHS domain family; The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal Transducing Adaptor Molecule). It has a superhelical structure similar to that of the ...
    cd14231
    Location:180258
    GAT_GGA_like_plant; GAT domain found in uncharacterized Golgi-localized gamma ear-containing Arf-binding protein (GGA)-like proteins mainly found in plants
  7. NM_001334756.1NP_001321326.1  Target of Myb protein 1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WPY9, A0A1P8AQI5
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