U.S. flag

An official website of the United States government

BPS1 BPS1-like protein (DUF793) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839536, updated on 18-Sep-2024

Summary

Official Symbol
BPS1
Official Full Name
BPS1-like protein (DUF793)
Primary source
TAIR:AT1G01550
Locus tag
AT1G01550
See related
Araport:AT1G01550
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
BYPASS 1; F22L4.9; F22L4_9
Summary
Encodes a protein with no functionally characterized domains that to prevent the synthesis of a novel substance that moves from the root to the shoot, where it modifies shoot growth by interfering with auxin signaling. Synthesis and delivery of this substance requires neither phloem nor endodermis.
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See BPS1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (199527..201775)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene AGAMOUS-like 28 Neighboring gene Protein kinase superfamily protein Neighboring gene MAP kinase 11 Neighboring gene transferring glycosyl group transferase (DUF604)

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

NM_001035852.3
NM_100037.4

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus  

General protein information

Preferred Names
BPS1-like protein (DUF793)
NP_001030929.1
  • BYPASS 1 (BPS1); FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_563630.1
  • BYPASS 1 (BPS1); FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46080.1); Has 170 Blast hits to 170 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    199527..201775
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100037.4NP_563630.1  BPS1-like protein (DUF793) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_563630.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LMM6
    UniProtKB/TrEMBL
    A0A178WGC1, A0A5S9S350
    Conserved Domains (1) summary
    cl21731
    Location:36262
    DUF677; Protein of unknown function (DUF677)
  2. NM_001035852.3NP_001030929.1  BPS1-like protein (DUF793) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001030929.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LMM6
    UniProtKB/TrEMBL
    A0A178WGC1, A0A5S9S350
    Conserved Domains (1) summary
    cl21731
    Location:36262
    DUF677; Protein of unknown function (DUF677)
External link. Please review our privacy policy.