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ARF1A1C Ras-related small GTP-binding family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819330, updated on 18-Sep-2024

Summary

Official Symbol
ARF1A1C
Official Full Name
Ras-related small GTP-binding family protein
Primary source
TAIR:AT2G47170
Locus tag
AT2G47170
See related
Araport:AT2G47170
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ADP-RIBOSYLATION FACTOR; BEX1; bfa-visualized exocytic trafficking defective 1; T8I13.1
Summary
Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. Members of this family are known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.
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Genomic context

See ARF1A1C in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Sequence:
Chromosome: 2; NC_003071.7 (19366596..19368840)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene miscRNA Neighboring gene HCO3- transporter family Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene galactinol synthase 1 Neighboring gene ncRNA Neighboring gene myb domain protein 2

Interactions

General gene information

NM_001337250.1
NM_001337251.1
NM_130285.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables GTP binding PubMed 
enables GTP binding PubMed 
enables GTPase activity  
enables mRNA binding PubMed 
enables phospholipase activator activity PubMed 
enables protein binding PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus PubMed 
located_in Golgi apparatus PubMed 
located_in Golgi apparatus  
located_in Golgi-associated vesicle  
located_in cytosol PubMed 
NOT located_in cytosol PubMed 
located_in early endosome PubMed 
located_in trans-Golgi network PubMed 

General protein information

Preferred Names
Ras-related small GTP-binding family protein
NP_182239.1
  • ARF1A1C; FUNCTIONS IN: phospholipase activator activity, GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: Golgi-associated vesicle; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1F (TAIR:AT1G10630.1); Has 15041 Blast hits to 15022 proteins in 509 species: Archae - 14; Bacteria - 51; Metazoa - 7725; Fungi - 1942; Plants - 2032; Viruses - 3; Other Eukaryotes - 3274 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    19366596..19368840
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_130285.3NP_182239.1  Ras-related small GTP-binding family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_182239.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P36397, Q7G9L3
    UniProtKB/TrEMBL
    A0A178VXE5, A0A5S9X7P9, A0A654G139
    Conserved Domains (1) summary
    PLN00223
    Location:1181
    PLN00223; ADP-ribosylation factor; Provisional
  2. NM_001337250.1NP_001324310.1  Ras-related small GTP-binding family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P36397, Q7G9L3
    UniProtKB/TrEMBL
    A0A178VXE5, A0A5S9X7P9, A0A654G139
    Conserved Domains (1) summary
    PLN00223
    Location:1181
    PLN00223; ADP-ribosylation factor; Provisional
  3. NM_001337251.1NP_001324311.1  Ras-related small GTP-binding family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P36397, Q7G9L3
    UniProtKB/TrEMBL
    A0A178VXE5, A0A5S9X7P9, A0A654G139
    Conserved Domains (1) summary
    PLN00223
    Location:1181
    PLN00223; ADP-ribosylation factor; Provisional
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