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DSS1(I) deletion of SUV3 suppressor 1(I) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842783, updated on 18-Sep-2024

Summary

Official Symbol
DSS1(I)
Official Full Name
deletion of SUV3 suppressor 1(I)
Primary source
TAIR:AT1G64750
Locus tag
AT1G64750
See related
Araport:AT1G64750
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATDSS1(I); deletion of SUV3 suppressor 1(I); F13O11.6; F13O11_6
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Genomic context

See DSS1(I) in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (24052362..24053923, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene GroES-like zinc-binding alcohol dehydrogenase family protein Neighboring gene Polyketide cyclase/dehydrase and lipid transport superfamily protein Neighboring gene miscRNA Neighboring gene alpha-1 tubulin Neighboring gene ncRNA Neighboring gene O-Glycosyl hydrolases family 17 protein Neighboring gene NDH-dependent cyclic electron flow 1

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_001198382.1
NM_105149.4
NM_202361.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 
involved_in proteasome assembly IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within response to hydrogen peroxide IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
 
part_of proteasome regulatory particle, lid subcomplex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
deletion of SUV3 suppressor 1(I)
NP_001185311.1
  • deletion of SUV3 suppressor 1(I) (DSS1(I)); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DSS1/SEM1 (InterPro:IPR007834); BEST Arabidopsis thaliana protein match is: DSS1 homolog on chromosome V (TAIR:AT5G45010.1).
NP_564839.1
  • deletion of SUV3 suppressor 1(I) (DSS1(I)); CONTAINS InterPro DOMAIN/s: DSS1/SEM1 (InterPro:IPR007834); BEST Arabidopsis thaliana protein match is: DSS1 homolog on chromosome V (TAIR:AT5G45010.1); Has 305 Blast hits to 305 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 77; Plants - 68; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
NP_974090.1
  • deletion of SUV3 suppressor 1(I) (DSS1(I)); CONTAINS InterPro DOMAIN/s: DSS1/SEM1 (InterPro:IPR007834); BEST Arabidopsis thaliana protein match is: DSS1 homolog on chromosome V (TAIR:AT5G45010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    24052362..24053923 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001198382.1NP_001185311.1  deletion of SUV3 suppressor 1(I) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001185311.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4I886
  2. NM_105149.4NP_564839.1  deletion of SUV3 suppressor 1(I) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564839.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9XIR8
    UniProtKB/TrEMBL
    A0A178WIW0, A0A384KR55, Q2PDG5
  3. NM_202361.1NP_974090.1  deletion of SUV3 suppressor 1(I) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974090.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9XIR8
    UniProtKB/TrEMBL
    A0A178WIW0, A0A384KR55, Q2PDG5