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CCR4 CRINKLY4 related 4 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834836, updated on 18-Sep-2024

Summary

Official Symbol
CCR4
Official Full Name
CRINKLY4 related 4
Primary source
TAIR:AT5G47850
Locus tag
AT5G47850
See related
Araport:AT5G47850
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATCRK1; CRINKLY4 related 4; MCA23.19; MCA23_19
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Genomic context

See CCR4 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (19378669..19381190, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene adenosine monophosphate kinase Neighboring gene Gut esterase (DUF1350) Neighboring gene cobalt ion-binding protein Neighboring gene eukaryotic release factor 1-1

General gene information

NM_124159.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables kinase activity  
enables protein homodimerization activity PubMed 
enables protein kinase activity PubMed 
enables protein serine/threonine kinase activity  
Component Evidence Code Pubs
located_in extracellular region  

General protein information

Preferred Names
CRINKLY4 related 4
NP_199596.1
  • CRINKLY4 related 4 (CCR4); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 3 (TAIR:AT3G55950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    19378669..19381190 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124159.3NP_199596.1  CRINKLY4 related 4 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199596.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FIJ6
    UniProtKB/TrEMBL
    A0A178UHQ2, A0A5S9YC19
    Conserved Domains (2) summary
    smart00219
    Location:449729
    TyrKc; Tyrosine kinase, catalytic domain
    cd14066
    Location:449730
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
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