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coiled-coil 90B-like protein (DUF1640) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816144, updated on 18-Sep-2024

Summary

Official Full Name
coiled-coil 90B-like protein (DUF1640)
Primary source
TAIR:AT2G16460
Locus tag
AT2G16460
See related
Araport:AT2G16460
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F16F14.4; F16F14_4
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Genomic context

Location:
chromosome: 2
Exon count:
7
Sequence:
Chromosome: 2; NC_003071.7 (7133387..7135812, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Minichromosome maintenance (MCM2/3/5) family protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene GW repeat- and PHD finger-containing protein NERD Neighboring gene XH domain-containing protein

General gene information

NM_127199.4
NM_201744.1

Gene Ontology Provided by TAIR

General protein information

Preferred Names
coiled-coil 90B-like protein (DUF1640)
NP_565388.1
  • Protein of unknown function (DUF1640); FUNCTIONS IN: metal ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1640 (InterPro:IPR012439); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1640) (TAIR:AT3G51090.1); Has 484 Blast hits to 482 proteins in 154 species: Archae - 0; Bacteria - 7; Metazoa - 175; Fungi - 188; Plants - 83; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
NP_973473.1
  • Protein of unknown function (DUF1640); FUNCTIONS IN: metal ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1640 (InterPro:IPR012439); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1640) (TAIR:AT3G51090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    7133387..7135812 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127199.4NP_565388.1  coiled-coil 90B-like protein (DUF1640) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565388.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VYD8, Q8VYZ9, Q9SIV6
    Conserved Domains (1) summary
    pfam07798
    Location:55228
    DUF1640; Protein of unknown function (DUF1640)
  2. NM_201744.1NP_973473.1  coiled-coil 90B-like protein (DUF1640) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973473.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4IKD6
    Conserved Domains (1) summary
    pfam07798
    Location:55169
    DUF1640; Protein of unknown function (DUF1640)
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